Gene Dtur_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0875 
Symbol 
ID7082830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp903443 
End bp904672 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content37% 
IMG OID643457951 
Producttype II secretion system protein 
Protein accessionYP_002352770 
Protein GI217967264 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1459] Type II secretory pathway, component PulF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGG TTTATGTTTA TCAGGCACGA AATATGAAAG GAGAGCTTAT CACGGGAGAG 
TATGAAGCTG AAAATATAAG AGAAGTAGCT ATAAGGTTAA GGGGAATGAA TTTGTATCCT
GTAAGAATAG AGGAAAAAAG AACGCCGTCT TCTTTTTTCA GTTTGACATT AGCACCTAAA
AAGGAGAAGG TTGGTAAGGT AAAATTAACA GACCTTACAG TATTTACCAG ACAGTTTGCC
ACGATGATTA ATGCAGGACT TTCTCTTTCT ACCTGTCTTA ATATTCTTTC TGAACAGAGT
GAAAGCAAGG CATTAAGGCA AATTTTAAAA GAAATTCAAA GAATGGTAGA CGAAGGAAGT
TCCCTTTCTG AAGCTTTTGC AAAATTTCCT AATGTGTTTT CTCCTTTATA TATTAATATG
GTAAAGGCAG CAGAGTCTGC TGGAACCCTT GATGAAACTT TGGAGAGACT TGCTGTAACC
CTGGAAAAGC AACAGGAATT AAGGAGAAAA ATAAAATCAG CTATGACCTA TCCAGTTATA
GTACTTATTA TTGCAATTGG GGCTGGATTT GGTATGTTGA CCTTTCTTGT TCCTATCTTT
GCAGGCATGT TTGAGAGTAT GGGAGCCCAA TTGCCATTGC CTACTTTAGT ACTTCTCAAG
ATGAGTAAAT TTATAACCAG TAATATACTT TTAATCCTCC TTGGAACAAT AATTTTGATA
CTTGGAGCTA TAAGAGCTTG GAAAAATCCT AAGATAAAAG ATAAGATAGA TGAAATACTC
TTGAAAATTC CAGTTTTTGG AGGATTAATC CAAAAAACTT CTGTGGTGAA TTTTGCAACT
ACCCTTGCTG CACAGGTAAG AACTGGAGTA CCCATACTTC AGGCTCTTCA ACTTGCTGGT
CAGACCGCAG GAAATAGTGT ATTCAGAAAA GCCATAGACT TAACAAGGCA GAGAGTAAGA
GAAGGAGAAA GAATTGCTCC TGTGTTAAAG GAGACAAAAG TATTCCCTCC CATGGTGGTA
CATATGATAT CCATTGGAGA AGAATCAGGT TCCTTGGAGC AAATGCTAAA CAAAATTGCA
GAGTTCTATG AAGGAGAAGT TGCAGCAGCA GTTGAAAGTC TGACCTCTCT TATTGAACCT
TTGATGATGG TATTTGTAGG TGGTATAGTT GGTGGGATGT TAATTGCATT ATATCTTCCT
ATTTTTACCA TGTTCCAGTA CATAAAATGA
 
Protein sequence
MAKVYVYQAR NMKGELITGE YEAENIREVA IRLRGMNLYP VRIEEKRTPS SFFSLTLAPK 
KEKVGKVKLT DLTVFTRQFA TMINAGLSLS TCLNILSEQS ESKALRQILK EIQRMVDEGS
SLSEAFAKFP NVFSPLYINM VKAAESAGTL DETLERLAVT LEKQQELRRK IKSAMTYPVI
VLIIAIGAGF GMLTFLVPIF AGMFESMGAQ LPLPTLVLLK MSKFITSNIL LILLGTIILI
LGAIRAWKNP KIKDKIDEIL LKIPVFGGLI QKTSVVNFAT TLAAQVRTGV PILQALQLAG
QTAGNSVFRK AIDLTRQRVR EGERIAPVLK ETKVFPPMVV HMISIGEESG SLEQMLNKIA
EFYEGEVAAA VESLTSLIEP LMMVFVGGIV GGMLIALYLP IFTMFQYIK