Gene Dtur_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0609 
Symbol 
ID7081649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand- 
Start bp609930 
End bp610946 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content30% 
IMG OID643457685 
ProductCRISPR-associated RAMP protein, Csm4 family 
Protein accessionYP_002352511 
Protein GI217967005 
COG category[L] Replication, recombination and repair 
COG ID[COG1567] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) 
TIGRFAM ID[TIGR01903] CRISPR-associated RAMP protein, Csm4 family 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAG AAGTTTATAA ACTTCTTAAA GAGGGACCAT TACTCTTACA TATAGGTCTT 
AGGAGATTAG ATAGAACATC TAATATAATT CATTCTGATA CCCTTTTCTC TGCTTTATCT 
AATTCACTTA TTAAGCTTTT TGGAGAAGAA AAATTTGATC TCTTTGAAAA AAATTTAGTT 
ATATCATCGG TTTTTCCAGG CTTACGTCTT TCAAAAGACA TCCTACTTTT ACCAAAGCCT 
GAAATCCCTA TAAAAACTTC TGAAGAGGAT CACAAAAAAT ATAAAAAGTT TCAATGGATA 
TCCCTTGATG CTCTGAAAAA ATTATTGGCA AATTTTGATA AAAACTCAAA ACAAATCTTT 
ATACAAAATG TAGAAGAGTT TAAATTTTTA AACCCAAGAA CTTTAATTAC AAAGTCTGAA 
TTTGAAGAAA TAGGAGAAGA AATATATTTC ATGGGTACAA CTCTTGAGCC AAAGGTAAGA 
GTTAGCAGAG AGACTTATTA TAAAGCAAAG GCGGATGAGG AAAATTCCTA TACTACACTT 
TACTTTCAAG AGAATTTAGA ACTTCATCCT ATAAAACTCT CAAACAGAAA AACCATTATC 
CCATTTCTCT ATTTCCTAAA GATGAAAAAT AATGAAATTG AAGAGTTATT CACACCTTCT 
TTAAGTCTTA CCCTTGAAGA AGGGTTAGGA GGAGAAAGAA CCACAGGTAA AGGTATATTT 
GATACCTTTG AAAAAGAGGA GCTTGAAGTT CCAGAAAATG GAGAATTTGA AATAAGTCTT 
TCTCTAACAT TTCCAAAAAG AGAAGAAGTA AATAATTTAA TTTACTATCA ATTAGTAAAA 
AGGGATGGAT TTATATATTA TCAAAAACCC ACAGGATACA GGAAAAAGAC TCATTATAAG 
ATAGCAGAAG GTGCCTTAGT AAGATCTCCA TATGTGGGCG AAAACATAAA CGTTTCCCCT 
ATAAGTTCAA TGAAAGTTAT ATCCTATGGA AAATCTTTAG GCTTTAAAAT ATCTTAA
 
Protein sequence
MKVEVYKLLK EGPLLLHIGL RRLDRTSNII HSDTLFSALS NSLIKLFGEE KFDLFEKNLV 
ISSVFPGLRL SKDILLLPKP EIPIKTSEED HKKYKKFQWI SLDALKKLLA NFDKNSKQIF 
IQNVEEFKFL NPRTLITKSE FEEIGEEIYF MGTTLEPKVR VSRETYYKAK ADEENSYTTL 
YFQENLELHP IKLSNRKTII PFLYFLKMKN NEIEELFTPS LSLTLEEGLG GERTTGKGIF 
DTFEKEELEV PENGEFEISL SLTFPKREEV NNLIYYQLVK RDGFIYYQKP TGYRKKTHYK 
IAEGALVRSP YVGENINVSP ISSMKVISYG KSLGFKIS