| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtur_0410 |
|---|
| Symbol | fucI |
|---|
| ID | 7081614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dictyoglomus turgidum DSM 6724 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011661 |
|---|
| Strand | + |
|---|
| Start bp | 412829 |
|---|
| End bp | 414649 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643457501 |
|---|
| Product | L-fucose isomerase |
|---|
| Protein accession | YP_002352328 |
|---|
| Protein GI | 217966822 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2407] L-fucose isomerase and related proteins |
|---|
| TIGRFAM ID | [TIGR01089] L-fucose isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.308786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGAA TTTTTCCTAT GAGAATTGGG GAGAAAAGGT TTATTGAGGA TTATCCTAAG
GTGGGAATAC GTCCAACCAT TGATGGTAGA TATGGTGGAG TAAGAGAATC ATTAGAAGAG
CAAACCATGA ATTTAGCAAA AGCTGTGGCT GAATTTATTG AAAACAACGT TTATTTACCT
AATGGAGAGA GAGTTAAGTG TGTAATTCCT CAAAGGTGTA TTGGGGGAGT AGCTGAAGCA
AGAATGGCAG ATGAGCTATT TAGAAAAGAA GGGGTAGGAG TTTCTATTAC TGTTACGCCC
TGCTGGTGTT ATGGTGCAGA AACTATGGAT ATGAGCTTGG ATATACCAAA GGCAGTCTGG
GGTTTTAATG GGACTGAGAG ACCTGGAGCT GTATATTTAG CAGCTGTTTC TGCTGCACAT
AATCAAAAGG GACTGCCTAT ATTTAAGATC TATGGAAAAG ATGTACAAGA TAAAGACGAT
TACAATATAC CGTTAGATGT GAAAGAAAAG ATTTTGAAAT TTGTTAAAAG CGCCCTCGCA
GTAGCAGTTA TGAAGAATAA ATCTTATCTT TCCATTGGGA GTGTTTCTAT GGGAATTGCA
GGGTCTATTG TAGATCCAGA CTTCTTTGAA GATTATTTAG GAATGAGAGT TGAGTATGTA
GATATGACTG AAATTATCAG AAGAATAGAG AGAAAAATTT ACGATGAAGA AGAATTTAAG
AGGGCAATGG AATGGGTGAG AAAGTATTGT AAGGAGGGAG AAGATCCAAA TCCTCCTGAT
AAGAGGGTTG ATGAAAAGAA GAAACAGGAG GTTTGGGAAT TTGTAGTTAA AATGACTCTA
ATTATAAGAG ATTTAATGGT GGGAAATAAA AAATTAGAAG AATTGGGTTA TCCTGAGGAA
AGCTTAGGGC ATAATGCGAT AGTTGCAGGT TTTCAAGGAC AACGTCAATG GACAGATCAC
TTTCCTAATG GCGATTTTAC AGAGGCAATT TTAAATACTT CCTTTGATTG GAATGGGTTA
AGACAACCAT ATATATTGGC TACAGAAAAT GATAGCCTCA ATGGGGTAGT TATGCTTTTT
GGGCATTTGT TAACAAATAC TGCTCAGATC TTTGCTGATG TAAGAACTTA CTGGAGTCCT
GAAGCAATTT ATAGAGTTAC AGGTTGGAAA CCAGAGGGAT TAGCTCAAAA CGGAGTAATT
CATCTGATAA ATTCAGGACC TGCAGCCCTT GATGGAACAG GTCAACAGGA AATTGAAGGT
AAACCAGCAA TAAAACCATT CTGGGAGATA AGTGATGAGG AGGTTATAAA GTGTTTGGAT
GCAACCAAAT TCTGCTATGC CAATTTAGGC TACTTTAGGG GTGGAGGATT CTCTACTAAG
TTCGTTACAA GAGGGGAAAT GCCTGTAACT ATAAGTAGAT TAAATATAGT TAAGGGGCTT
GGTCCTGTGT TACAGATTGC TGAGGGATAT ACAGTAGAAC TCCCTCCTCA TGTTCATGAA
GTTCTTGATA AAAGGACAGA TCCTACTTGG CCTACCACTT GGTTTGTTCC TAAATTAACA
GGGAAAGGTG CTTTTAAGAG TGTCTATTCT GTAATGGAGA ATTGGGGGGC TAATCATTGT
GCTATAACTT ATGGACATGT AGGAGATTTG TTTATTACCC TTGCTTCCAT TTTAAGAATC
CCAGTGAATA TGCATAATGT GGAAGAAGAA AGAATTTTTA GGCCCAGTGC CTGGTCCATG
TTTGGTACCG AAGAGTTAGA AAGTGCAGAT TTTAGAGCTT GTATGAATTT TGGCCCTTTG
TATAAGAAAG TAGCAAAATA A
|
|---|
| Protein sequence | MSRIFPMRIG EKRFIEDYPK VGIRPTIDGR YGGVRESLEE QTMNLAKAVA EFIENNVYLP
NGERVKCVIP QRCIGGVAEA RMADELFRKE GVGVSITVTP CWCYGAETMD MSLDIPKAVW
GFNGTERPGA VYLAAVSAAH NQKGLPIFKI YGKDVQDKDD YNIPLDVKEK ILKFVKSALA
VAVMKNKSYL SIGSVSMGIA GSIVDPDFFE DYLGMRVEYV DMTEIIRRIE RKIYDEEEFK
RAMEWVRKYC KEGEDPNPPD KRVDEKKKQE VWEFVVKMTL IIRDLMVGNK KLEELGYPEE
SLGHNAIVAG FQGQRQWTDH FPNGDFTEAI LNTSFDWNGL RQPYILATEN DSLNGVVMLF
GHLLTNTAQI FADVRTYWSP EAIYRVTGWK PEGLAQNGVI HLINSGPAAL DGTGQQEIEG
KPAIKPFWEI SDEEVIKCLD ATKFCYANLG YFRGGGFSTK FVTRGEMPVT ISRLNIVKGL
GPVLQIAEGY TVELPPHVHE VLDKRTDPTW PTTWFVPKLT GKGAFKSVYS VMENWGANHC
AITYGHVGDL FITLASILRI PVNMHNVEEE RIFRPSAWSM FGTEELESAD FRACMNFGPL
YKKVAK
|
|---|
| |