Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3540 |
Symbol | |
ID | 7384666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3790382 |
End bp | 3791581 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643656857 |
Product | integrase family protein |
Protein accession | YP_002554963 |
Protein GI | 222112699 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAA TCAAGCTCAC TAAGTCCGCA GTCGATGCGG CACAACCGCA GGCGCAAGCC GTCGAACTCC GGGACACGCT GGTGCCCGGC TTCTTGTGCA AGATTACACC AGCGGGCCGC AAGGTGTTCA TGCTCCAGTA CCGCACGAAC GCCGGCGAGC GGCGCAAGCC CGCATTGGGC CTGTACGGGG AACTGACCGT CGAGCAGGCC CGTTCGCTGG CCCAGGAATG GCTGGCCGAG GTGCGCCGGG GCGGCGACCC CAGCGCTGCC AAGGCCGCCG CCCGTTCAGC CCCCACGGTC AAGGAGCTGT GCACCAAGTT CATGGAGGAC TACTCCAAGC AGCGCAACAA GCCCAGCACC CAGCGCGGGT ATCAGGCCGT CATCGACCGC TGCATCGTTC CGATGCTGGG CCGTTTGAAG GTTCAGGACG TGAAGCGGCC GGACGTGGCC ACGGCGATGA AGAAGATGGC CCACAAGCCC GCCGAGGCCA ACCGTGCTTT CAGCGTGATG CGCAAGATGT TCAACCTGGC CGAGGTGTGG GGCCACCGGC CTGACGGCAC CAACCCTTGC CGCCACGTCC CGATGTATCC CAACGGCAGG GCTACCCACC TCATCAGCGA CGAGGACATG GGCAAGCTGT TTCGGCGACT GGAGCACATC GAAGCCGAGG GTCTGGAGAA CTACGTCATC CCGCTGGCGA TCCGTCTGCA ATTCGAGTTC GCCGGCCGCC GCTCCGAAAT CGTGACGCTC CGATGGGATT GGGTGGACCT GGACAACCGC CGCGTGGTCT GGCCGGACAG CAAGACGGGC GGCATGTCCA AGCCCATGAG CGAGGAAGCC TATCGACTGC TCTCGACGGC GCCACGGCAG GAAGGCACTC CCTATGTGCT GCCGTCTCCA AGCCATCCCG GCAAGCACCT GACCACGGGC GAGTATTACG GCGGCTGGAG CCGCGCCCTC AAGGCGGCGG GCGCCACGCA CGTCGGCACG CATGGCATCC GCCACCGCTC CGCGACCGAC ATTGCCAACT CGGGCATCCC GGTCAAGGTC GGCATGGCGC TGACGGCGCA CAAGACCGTG GCGATGTTCA TGCGCTACGT CCACACCGAG GACGATCCGG TGCGCAAGGC GGCCGAGCTG GTGGCGAACC GGCGCAAGAC GATCACCGAG GCGCAACGTC CCGCAGAGGT GGCAGCATGA
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Protein sequence | MAKIKLTKSA VDAAQPQAQA VELRDTLVPG FLCKITPAGR KVFMLQYRTN AGERRKPALG LYGELTVEQA RSLAQEWLAE VRRGGDPSAA KAAARSAPTV KELCTKFMED YSKQRNKPST QRGYQAVIDR CIVPMLGRLK VQDVKRPDVA TAMKKMAHKP AEANRAFSVM RKMFNLAEVW GHRPDGTNPC RHVPMYPNGR ATHLISDEDM GKLFRRLEHI EAEGLENYVI PLAIRLQFEF AGRRSEIVTL RWDWVDLDNR RVVWPDSKTG GMSKPMSEEA YRLLSTAPRQ EGTPYVLPSP SHPGKHLTTG EYYGGWSRAL KAAGATHVGT HGIRHRSATD IANSGIPVKV GMALTAHKTV AMFMRYVHTE DDPVRKAAEL VANRRKTITE AQRPAEVAA
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