| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3521 |
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| Symbol | |
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| ID | 7384647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3775782 |
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| End bp | 3776369 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643656840 |
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| Product | TraF peptidase. Serine peptidase. MEROPS family S26C |
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| Protein accession | YP_002554946 |
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| Protein GI | 222112682 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAG TTTCCACTTC CGGCACCGCG CCGCCCCCTC GCTTGCGCGT GCGCGCTCGC
CTCGTGTTGG CGGGCCTGTC CGCCTGCGGC CTCGCTGCGC TGGCCTGGGC GTCCTTCGTG
CATCCACTGC CGCGCCTGAC CTACAACCCG TCCGACAGCG TGGCGGTCGG TTGGTATCGC
GTCGATCCGC TCGACCGTCG CACCAGCTCG CCGCCACGTC GGCTGGAAGT GGGTAGCATC
GTGCTGGTGC CGCTGCCTGC CGAGGCTGCC GCGCTCGCTG CGCAGCGCAG CTACCTGCCG
ACGCGCATCC CACTGCTCAA GCGCGTGGGC GCGGTCGCAC CGCAGGAGGT GTGCGTCATT
GGGGGCAGCG TCCGCATCGA CGGCGTGCCT TCGGCCGCCG TGCTGTCTGC CGATCGCTGG
GGCCGGCCGC TGCCATCTTG GCAGCAGTGC CGCCGCCTTC GGCCTGGCGA ACTGTTCCTG
CTCAGCGTCA CCAATCCGGC GTCGTTCGAC AGCCGGTATT TCGGGCCGGT CAACGCCGCC
TCCGTGATCG GCGTTGCGCG CCCGGTCTGG CTGGAGTCGC GCCCATGA
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| Protein sequence | MTAVSTSGTA PPPRLRVRAR LVLAGLSACG LAALAWASFV HPLPRLTYNP SDSVAVGWYR
VDPLDRRTSS PPRRLEVGSI VLVPLPAEAA ALAAQRSYLP TRIPLLKRVG AVAPQEVCVI
GGSVRIDGVP SAAVLSADRW GRPLPSWQQC RRLRPGELFL LSVTNPASFD SRYFGPVNAA
SVIGVARPVW LESRP
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