| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3498 |
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| Symbol | |
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| ID | 7382032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3748734 |
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| End bp | 3749726 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643656817 |
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| Product | P-type conjugative transfer protein TrbG |
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| Protein accession | YP_002554923 |
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| Protein GI | 222112659 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATC TTTTCCGTAA ATCCGCCTTG CCGGTGATGC TTCTGGCTTC GACCGTGCTG
TTCTCTGGTT GCGCCACGCA GGGCAAGCCG CCGCCGTCCA TTTCGCTCGA TGAGCCGGTG
CAGGCCCAGC CACTGCCGGA GCCGCCTGCG CCTGTGGAGG TGGTGGCCGT GCCGCAGGTG
CTGCCGATGC CGGCGCAGAT GAAACCTGTG CCGGATGCCA AGCCCGCCGC AGAACCCGCC
GATGAAACCT TGCGGGTGTC CCGCGCCAAC GCCGAGGCGC GCATTGCGCC CACGCGCGAA
GGCTACGTCA ATGCGATTCA GGTGTGGCCC TTCACGGATG GCGCGCTGTA CCAGGTCTAT
GCGGCCGTGG GCCGCGTGAC CGTGATCGCG CTCCAGCCCG GTGAGGAACT GGTGACGGTG
GCCGCAGGCG ATACCGTGCG CTGGATCGTG GGCGACACAT CGAGCGGCAG CGGTGATGCG
CTGCGCGTCA ATGTGATGGT CAAACCGATC CGCTCGGGCC TCAAGACCAA TCTGGTCATC
ACGACCAGCC GTAGGACGTA CCTGCTGGAG CTGACCTCGA CCGAGAAGAC GTGGATGGCG
TCGGTGTCCT GGGAGTATCC GAAGGACAAG ATGCTGGCCT TGCAGCGCCA GTCGCAGGTG
GCCAATGCCG CCGCGCCAGT CGATGCCGGG CTGTCGCTGG AGAAGATCCG TTTCCGCTAC
GCCGTCAGCG GCAGCAATCC GCCCTGGAAG CCGCTGCGCG CTTTCGACGA CGGCGAGAAG
GTCTACATCC AGTTTCCGCC GGGCATTGCC CAAGGCGAGT TGCCGCCGCT GTTCGTGATC
GGCGCGCAGG GCGACGGGCA ACTGGTGAAC TACCGCTTCC GCGCGCCGTA CTACATCGTG
GATCGGCTGT TTGGCGCGGC CGAGCTGCGC CTGGGCGGAG ACAAGGGCGA TGTGGTGCGG
ATCGAGCGCA CGGACGGCAC GCGGAGGAAC TGA
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| Protein sequence | MNDLFRKSAL PVMLLASTVL FSGCATQGKP PPSISLDEPV QAQPLPEPPA PVEVVAVPQV
LPMPAQMKPV PDAKPAAEPA DETLRVSRAN AEARIAPTRE GYVNAIQVWP FTDGALYQVY
AAVGRVTVIA LQPGEELVTV AAGDTVRWIV GDTSSGSGDA LRVNVMVKPI RSGLKTNLVI
TTSRRTYLLE LTSTEKTWMA SVSWEYPKDK MLALQRQSQV ANAAAPVDAG LSLEKIRFRY
AVSGSNPPWK PLRAFDDGEK VYIQFPPGIA QGELPPLFVI GAQGDGQLVN YRFRAPYYIV
DRLFGAAELR LGGDKGDVVR IERTDGTRRN
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