Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3495 |
Symbol | trmE |
ID | 7382029 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3745475 |
End bp | 3746878 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643656814 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_002554920 |
Protein GI | 222112656 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCCGC GCCATTCCGA CCCCATCGTT GCCATTGCCA CCGCGCCGGG GCGCGGCGCG GTCGGCATCG TGCGGGTCTC GGGCAAGCAG ATCGGTGCAC TGGTGCAGGC GCTGTGCGGC CGTGCGCTCA AGCCGCGCGA GGCCACCTAT CTGCCGTTTC GGGATGCCGC GGGCCAGGCC ATCGACCAGG GGCTGGCGCT GTACTTTCCC GCGCCGCACA GCTACACCGG CGAGGACGTG CTGGAGCTGC AGGCCCATGG CGGCCCCGTG GTGCTGCAGC TGCTGCTGGC GCGCTGCCTG GAGGCTGCCA CGGGCGGCGT GCTGGACCGC CTGCGGCTGG CCGAGCCCGG CGAGTTCACC GAGCGCGCCT TCCTCAACAA CAAGATCGAC CTGGCCCAGG CCGAGGCGAT CGCCGACCTG ATCGACGCCA GCACCGAGGC GGCCGCGCGC GGCGCCAGCC GTTCGCTGTC GGGCGACTTC TCGCGCGAGA TCCACACGCT GCGTGACGCG CTGGTGCACC TGCGCATGCT GGTGGAGGCC ACCCTGGACT TTCCTGAAGA GGAAATCGAC TTCCTGCGCA AGGCAGACGC GCGCGGGCAG CTATCGAATT TGCAGCAATC GCTGGCCCGC GTGATGCAGC GTGCCGGCCA AGGCGCGTTG CTGCGCGAGG GCATTAAGGT GGTGATCGCC GGGCAGCCTA ACGCGGGCAA GAGCTCGCTG CTGAACGCGC TGGCAGGGGC GGAACTGGCC ATCGTCACGC CGATCGCCGG CACCACGCGC GACAAGGTGC AGCAGACCAT CCAGATCGAG GGCGTGCCGC TGCACGTGAT CGACACGGCG GGCCTGCGCG AAAGCGACGA CGAGGTCGAG CGCATCGGCA TCGCCCGCGC CTGGGACGAG ATCGCGGGCG CCGACGCGGT GCTGTTCCTG CACGACCTCA CGCGCTGGGG CAGTGCGCAG TACCAGGACG ACGACGCCGC CATTGCGCAC ACGCTCTCCA CCCGGCTGCC CGCGGGCGTG CCGGTGGTCG ACGTCTGGAA CAAGGCCGAC GCCGCCCCGC AGGCGGCGGC GCCTGCGCGC GAGGGTGAGA GCCAGGCGGT GCTGCTGTCC GCGCGCACCG GCCAGGGGCT GGATACGCTG CGTCGGCAAT TGCTGCAAAT CGCGGGCTGG CAGTCGGCTG CGGAGGGCGT GTACATCGCC CGCGCGCGCC ACATCGAAGC CTTGCGCGCC GTGGACGCCC ACCTCATGGA GGCGGCCGCG CAGCTGGAAA GCGACGGGCC GGCGCTGGAC CTGCTGGCCG AGGAGCTGCG CCTGGCGCAA AACGCCCTCA ACACCATCAC GGGCGAGTTC ACGTCCGACG ATCTGCTCGG TGTCATCTTC TCCAGCTTCT GCATCGGCAA ATAG
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Protein sequence | MLPRHSDPIV AIATAPGRGA VGIVRVSGKQ IGALVQALCG RALKPREATY LPFRDAAGQA IDQGLALYFP APHSYTGEDV LELQAHGGPV VLQLLLARCL EAATGGVLDR LRLAEPGEFT ERAFLNNKID LAQAEAIADL IDASTEAAAR GASRSLSGDF SREIHTLRDA LVHLRMLVEA TLDFPEEEID FLRKADARGQ LSNLQQSLAR VMQRAGQGAL LREGIKVVIA GQPNAGKSSL LNALAGAELA IVTPIAGTTR DKVQQTIQIE GVPLHVIDTA GLRESDDEVE RIGIARAWDE IAGADAVLFL HDLTRWGSAQ YQDDDAAIAH TLSTRLPAGV PVVDVWNKAD AAPQAAAPAR EGESQAVLLS ARTGQGLDTL RRQLLQIAGW QSAAEGVYIA RARHIEALRA VDAHLMEAAA QLESDGPALD LLAEELRLAQ NALNTITGEF TSDDLLGVIF SSFCIGK
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