| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3480 |
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| Symbol | |
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| ID | 7382014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3730603 |
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| End bp | 3731790 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643656799 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002554905 |
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| Protein GI | 222112641 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.232889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTCC TCGATGTGCC CACCATGCTG CTGATGACCG CGGCGGCTTC CCTCACCATG
GCGGCATCCC TGGGCGCGGT GCGGCCGGCG CGCCGCGAGG GCATCAGCCT GTGGGCGGTG
GGGCTGATGA TGCACACCTC CACGTACGTG CTGTACGCCC TGCGCGGCCT GGTGTCCGAC
TGGGCCAGCA TCGTCCTGGC CAACACGCTG CTGTCGGGCA CGTTCGCCAT GGTGCTGGCG
GCCGTGCACC AGTTCCAGGG GCGGGAGTTG CCGTGGCGCC GCATGGCGGT GCCGGTCGCG
GCGACAGCGC TGTTGTTTGC GTTCTTCATT GACGACTACC GCGCACGCAT CGTCACGGCG
GGCGTGGTGC CGCCGCTGCA GCTGGGCATG GTGCTGTGGT CCCTGTGGCG CGAGCGGCCG
GCTGCGTCCC TGCGCGGCGC GACGCTGCTC AGCGTGGGCC TGGTGATGGA GGTACTGCTG
CTGGGGGTGC GCGGAATGCT CGCAGCCACG CGCGACATAC CGGTCGAGGG GCTGATGCAG
GGCAACGCCA TGCAGTCCAT CACCTTCATG GCGGCCTTCG TGGTGGTGAT CCTGAGTTCG
CTGGGCTTCA TCCTCATGGG CAAGGACCGC TCCGATGCCG ACAACCGCTA TTTCGCCGCG
CACGATGCGC TCACGGGGCT GGTCAACCGC CGTTCGCTCA TCATGGCGCT GGAGCGCGAT
GTGGCCCGCG CCGTGCGCCT GCGCGAGCCT TACGCGGTGA TGCTGGTGGA CATCGATCAC
TTCAAGTTCG TCAACGACAG CCATGGCCAC CTGGCGGGCG ACAGCGTGCT GCGCCATGTG
GCGGACCTGC TGCGCACGCG CCTGCGGGCG CAGGACCTGG TGGGTCGCTA CGGGGGTGAA
GAATTCATGG TCCTGTTGCC GCACACCCCG CTCGGCGGGG CCCTGGAGCT TGCCGAGACG
CTGCGCCGCG CCGTGGAGCG CTTGCCCTGT GTGGGCGGCG GCAAGGACAT ACCGGTGACC
GTGAGCATCG GCGTGTGTGG CGGGCCCCTG CAGCCCGCGG ACGGCTGGGA CAGGCTCGTT
CAGGGGGCCG ACGAGGCGCT GTATGCGGCC AAGCTCGCCG GGCGCAACCG GGTGGAGTCC
ACGGCGCTGG CGGCACCGCG CCCCGCGCCC GCACCGGCGG TGGACTAA
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| Protein sequence | MPFLDVPTML LMTAAASLTM AASLGAVRPA RREGISLWAV GLMMHTSTYV LYALRGLVSD
WASIVLANTL LSGTFAMVLA AVHQFQGREL PWRRMAVPVA ATALLFAFFI DDYRARIVTA
GVVPPLQLGM VLWSLWRERP AASLRGATLL SVGLVMEVLL LGVRGMLAAT RDIPVEGLMQ
GNAMQSITFM AAFVVVILSS LGFILMGKDR SDADNRYFAA HDALTGLVNR RSLIMALERD
VARAVRLREP YAVMLVDIDH FKFVNDSHGH LAGDSVLRHV ADLLRTRLRA QDLVGRYGGE
EFMVLLPHTP LGGALELAET LRRAVERLPC VGGGKDIPVT VSIGVCGGPL QPADGWDRLV
QGADEALYAA KLAGRNRVES TALAAPRPAP APAVD
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