Gene Dtpsy_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3478 
Symbol 
ID7382012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3728167 
End bp3729042 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID643656797 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_002554903 
Protein GI222112639 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.786791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAC TGAGCGAACC CACGCTGCGC CCCTTCACCG CCAGCGACGG TGAGAACCTC 
GCCGTACAGG ACTGGCCGCT GCCCGCGCAG GAGCGCCGCG GCGCCGTGCT GCTGGTGCAC
GGCCTGGGCG AGCACGCGGG GCGCTACGAG GCCCTGGCCC AGCGCCTGAA CGGCTGGGGC
TTCAGCGTGC GCGGCTACGA CCACTACGGC CACGGCGACT CCGGCGGGCC GCGAGGCGGC
CTCACCAGCG ACCTGCGCCT GCTGGCCGAC CTGGCGGACC TGGTGGACGC CACACGCACG
CGGCTGCGGC CCGGCGAGCC GCTGGTGCTG CTGGGCCACA GCATGGGCGG GCTGGTGGCG
GCGAGCTTCG TGGCGCGGGG CGTGCGCCCC GTGGATGCGC TGGTGCTCTC GTCGCCCGCG
CTGGCCACTT TCATGAACCC GCTGCAAAAG CTGCTGCTGG CCACGCTGCC CCGGCTGGTG
CCCAACCTGC GCGTGGGCAA CGGCCTGAAC CCCGAACACC TGTCGCACGA CCCGGCCGTG
GTGGCCGCCT ACCGGGCCGA CCGGCGTTGC CACGACCGCA TCAGCGCGCG GTTGGCGCGC
TTCATTGCCG ATGCCGGCCC CGCCACGCTG GCGCGCGCCG CGCGCTGGAC GGTTCCCACG
CTGCTGCTGT GGGGCGAGGA CGACCGCATC GTCAATCCCG CGGGCAGCCG TGCCTTCGCG
GCAGCGGCGC CCCCGGCCGT GGTGCATGCC CAGGGTTTTG CAGGGCTGTA CCACGAGATC
TTCAACGAGC GCGACGCGGC GCCCGTGTTC GCGCAACTGG AGTCGTGGCT GGAGCAGCGC
TGCCCGGTGC GCCGGGCGCA GCCCGTGGCG GCTTGA
 
Protein sequence
MQELSEPTLR PFTASDGENL AVQDWPLPAQ ERRGAVLLVH GLGEHAGRYE ALAQRLNGWG 
FSVRGYDHYG HGDSGGPRGG LTSDLRLLAD LADLVDATRT RLRPGEPLVL LGHSMGGLVA
ASFVARGVRP VDALVLSSPA LATFMNPLQK LLLATLPRLV PNLRVGNGLN PEHLSHDPAV
VAAYRADRRC HDRISARLAR FIADAGPATL ARAARWTVPT LLLWGEDDRI VNPAGSRAFA
AAAPPAVVHA QGFAGLYHEI FNERDAAPVF AQLESWLEQR CPVRRAQPVA A