| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3462 |
|---|
| Symbol | |
|---|
| ID | 7381996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 3707346 |
|---|
| End bp | 3708053 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643656782 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002554888 |
|---|
| Protein GI | 222112624 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAT TGCTGTCCGT GGAATCCGTT CACGCGCATT ACGGCAAAAG CCATGTGCTG
CAGGGCGTGT CGCTGCATGT CGGCGACGGC GAGCTCGTCA CGCTGCTGGG CCGCAACGGG
GCGGGCAAGA CCACCACGCT CAAGACCATC GCCGGCGTGA TGGCGCCCAC GCAAGGGCAA
GTCCGCTTCG GCGGCGAGCC CGTGCACCAG CTGGCCACCC ATCTGGTGGC ACAACGCGGC
ATCTGCCTGG TGCCGGAGCA CCGGGGCATC TTCAAGCTGC TCACGGTAGA AGAGAACCTG
TTACTGGGCC AGCGCAAGCA TTCGCCCTGG CAGCTGCCCG ACGTCTATCG CATCTTTCCG
CGCCTCAAGG AGCGCCGCGC CAATGGCGGT GGCCAGCTCT CGGGCGGCGA GCAGCAGATG
CTGGCCATCG GCCGCGCGCT CATGAACGCG CCGCGCCTGC TGATGCTGGA CGAGCCCGTG
GAGGGACTGG CGCCCGTGAT CGTCGAGGAG ATCGTGGCCC AGCTCCAGAC CATCAAGGCC
GCGGGCGTGT CCATCCTGCT GGTGGAGCAG AACCTCGAGG TCTGCACCCA GCTCGCCGAC
CGCCACTACG TCATCGAGCA GGGTGCCATC GTGCATGAGG CCAGCAACGT GGACTTCCTG
GCAGACGACG CCGTGAAGGA CCGCTACCTC GGCGTGGGCA TGGCCTGA
|
|---|
| Protein sequence | MKTLLSVESV HAHYGKSHVL QGVSLHVGDG ELVTLLGRNG AGKTTTLKTI AGVMAPTQGQ
VRFGGEPVHQ LATHLVAQRG ICLVPEHRGI FKLLTVEENL LLGQRKHSPW QLPDVYRIFP
RLKERRANGG GQLSGGEQQM LAIGRALMNA PRLLMLDEPV EGLAPVIVEE IVAQLQTIKA
AGVSILLVEQ NLEVCTQLAD RHYVIEQGAI VHEASNVDFL ADDAVKDRYL GVGMA
|
|---|
| |