Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3454 |
Symbol | |
ID | 7381988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3698217 |
End bp | 3699161 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643656774 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002554880 |
Protein GI | 222112616 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.169025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTAA AAAACGCCCG CCGTCCGCGT GCCGTGCTGG GGCAGCTATC CGACATGGAC CTGCGCCTGC TGCAGGTGTT CAAGGCCGTG GTCGAGTGCG GCGGCATGGC CGCGGCCGAG CTGGAGCTGA ACATCGGCAC CAGCACCGTG AGCCGCCATG TGAAGGACCT GGAGACGCGC CTGGGCCTGA CGCTGTGCCG GCGCGGGCGC GCGGGCTTTG CGCTCACGCC CGAGGGGCAG CGGGTCTATG AGGAGACGCT GCGCCTGCTG GCCTCGGTGC GTGGCTTTCT GGGCAGCATC GACGACATCC ACGACCGCAT GGGCGGACAA CTCGCCGTGG CGGTGTTCGA CAAGACGGCG AGCAACCCGG CCGCGCGCAT CGGCCAGGCG ATCGCCGCGT TCACCGGCCA GGCGCCGCAC GTGCAGCTGC AGCTGCACGT GGGCTCGATC AACGCCATCG AGCGCGGGGT GATCGACGGG AGCTTCCAGG TGGGCGTCAT CCCCGCGCAC CGCAGCTCGC AGAGCCTGGT CTATACCGAC CTGTTCGGCG AGACCATGCT GCTCTACTGC GGCGCGGGCC ATGCGCTGTT CGATGCGCCC CACGGCGCGC TGGACTGGGA CGCCGTGCGC GCATACCCCT TCGCGGGCCT GGGCTACCAC TCGCCCAACA TGGAGCTGAG CCACGAGGCG CGCCTGACGC GCAGCGCCAC GGGGTTCGAC CAGGAATCGA TCGCCACGCT GGTGCTGTCG GGGCGCTTCC TGGGCTTTCT GCCCGACCAC TACGCCGAGG GCTTCGAGCG CCAGGGGCGC ATGCGTGCCG TGCGGCCCGA CCTGTTCCGC TACGACTGCC GCTTCGTGAG CCTGGTGCGC CGCTCGCCCG AGCCCAGCCG CGCGGCGCAG CTGTTCGGGC GCTGTCTGCT GGATGCGCAC CAAAACGGGC TCTAG
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Protein sequence | MQVKNARRPR AVLGQLSDMD LRLLQVFKAV VECGGMAAAE LELNIGTSTV SRHVKDLETR LGLTLCRRGR AGFALTPEGQ RVYEETLRLL ASVRGFLGSI DDIHDRMGGQ LAVAVFDKTA SNPAARIGQA IAAFTGQAPH VQLQLHVGSI NAIERGVIDG SFQVGVIPAH RSSQSLVYTD LFGETMLLYC GAGHALFDAP HGALDWDAVR AYPFAGLGYH SPNMELSHEA RLTRSATGFD QESIATLVLS GRFLGFLPDH YAEGFERQGR MRAVRPDLFR YDCRFVSLVR RSPEPSRAAQ LFGRCLLDAH QNGL
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