| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3427 |
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| Symbol | |
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| ID | 7381961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3671025 |
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| End bp | 3673121 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643656748 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_002554854 |
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| Protein GI | 222112590 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.40271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCAT ATTCCTTCCG CGCGCCTGCC TTGCGGTGCG CGCCCCTGTC CTCGCACCTC
ACCCCCTGCG CGCTGGCCTG CGCGCTGCTG CTGGCCGGCC CGGCCCTGGC CGCGAACGAC
GCCGTGAACA ACGCGGCCGC GGCCCCCGAG CACACGCTGC GCGACGTGGT CGTCACGGCC
GTGCACGACC ACTCGCCCGT GCAGGTGGTG GCCGACCCCA AGCAGCCGCG CCAGCCCGTG
CCGGCCAGCG ACGCGGCCGA CTACCTCAAG ACCATCCCGG GCTTCTCGGC CATCCGCAGC
GGTGGCTCCA ACGGCGACCC GGTGTTCCGC GGCCAGTTCG GCTCGCGCCT GCCGCTGCTG
ACCAACGGCA CGCAGCTGCT GGGCGCCTGC CCGGGGCGCA TGGACGCGCC CAGCTCCTAC
ATCTCGCCCG AGACCTACGA CACGCTCACC GTCGTCAAGG GGCCGCAGAC CGTCGTCTGG
GGGCCGGGCA CCTCGGCCGG CGTGGTGCGC TTTGACCGCG AGCGCCCTGA CTTCACCGAA
CCCGGCGTGC GCCTCAGCGC CAGCCTGCTG GGCGCCAGCG CCGGGCGCAA CGACCAGAAC
GTGGACTTTC AGGCCGGCAA CGCGCAGGTG TACGTGCGCG TGACCGCCAA CCATTCCCAC
GGCCAGGACT ACAAGGACGG CGACGGACGG CGCGTGCCCT CGGCCTGGGA CAAATGGAAC
ACCGACGTGG CGCTGGGCTT CACGCCCGAC GCCGACACGC TGCTGGAGCT GAGCGCCGGC
ACGGGCGACG GCGAGGCGCG CTACGGCGGG CGCGGCATGG ACGGCACGCA GTTCAAGCGC
GAAAGCTGGG GCCTGCGCTT CGAGAAGCGC CACCTCACAC CCTGGCTGGC CAAGCTGCAG
GCACAGGTCT ACGGCAACCG CGCCGACCAC GTGATGGACA ACTTCACGCT GCGCACCTTC
CAGCCCGGCG GCAGCATGTC CATGCCCATG GCCAGCAACG TGCGGCGCAC CACCGAGGGC
GCGCGCGTGG CCGCCACGCT GCAGTGGCAG CCCGACTGGC AGCTGGAGAC CGGCCTGGAC
GCACAGCGCA GCCCGCACGA CAAGCGCAGC GGCACGCCCA GCGTGCCCTA CGACAGCAAG
CCCTGGATGC GCGACGCCAA GTTCGAGAAC CTGGGCGCAT TTGCCGAGCT GTCATGGCAG
GCCCAGGCCG ACACGCGCTG GGTGGGCGGC CTGCGCCTGG ACCGCGCCGA GGCCTGGCGC
TACCCTGCCC CGAGCGGCAT GGGCGGCATG GCCCCGGCGG CCGGCGCGGA CCACCGCACG
CGCTCGGCCA TGCCCAGCGG CTTCGTGCGC TGGGAACGCA CGCTGGCGCC GCAGGGCGCG
CTGGTCTACG CGGGCCTGGG GCACGTGCAG CGCTTTCCGG ACTACTGGGA GTTGATCTCC
CCCGGCAACG GCGCGGCCAG CGCCGGCAAC GCCTTCGCCA CGCTGCGCCC CGAGAAGACC
ACGCAGCTGG ACATGGGCGC GCAGTGGAAG GGCGCGGACT GGCAGCTGTG GACCTCGGCC
TATGTGGGCG TGGTGCGCGA CTACATCCTG TTCGACTACA CCGGCATGAA ATCGGCCGTG
CGCAACGTCG ACGCCCGCAC CGCCGGGCTG GAGCTGGGCG CCAGCCAGCG CCTGGGCACG
GCGTGGACGG CACAGGGCAC GCTGGCCTAC AGCTGGGGCC GCAACACCAG TGAAGGCCGC
CCGCTGCCGC AGATGCCGCC GCTGGAGGCA CGCCTGGGCC TGGAATACGC CCAGGGGCCG
TGGAGCGCCG GCGGCCTGTG GCGCCTGGTG GCCGCGCAGC ACCGCCATGC CAACGGCCAG
GGCAACGTGG TGGGCCGCGA CCTGGGCGCA AGCGCCGGCT TCGGCGTGCT GTCGCTGCAC
GCGGGCTACC GCATCAACGC GCAGCTGAAG CTTGCCGCCG GGGTGGACAA CCTGCTGGAC
AAGAACTACG CCGAGCACCT GAACCTGGCG GGCAACGCCG GCTTCGGCTA CCCGGGCGGC
GTGCGCATCA ACGAACCCGG CCGCACGCTG TGGCTGCGCG CGGACCTGCA GTTCTAG
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| Protein sequence | MTAYSFRAPA LRCAPLSSHL TPCALACALL LAGPALAAND AVNNAAAAPE HTLRDVVVTA
VHDHSPVQVV ADPKQPRQPV PASDAADYLK TIPGFSAIRS GGSNGDPVFR GQFGSRLPLL
TNGTQLLGAC PGRMDAPSSY ISPETYDTLT VVKGPQTVVW GPGTSAGVVR FDRERPDFTE
PGVRLSASLL GASAGRNDQN VDFQAGNAQV YVRVTANHSH GQDYKDGDGR RVPSAWDKWN
TDVALGFTPD ADTLLELSAG TGDGEARYGG RGMDGTQFKR ESWGLRFEKR HLTPWLAKLQ
AQVYGNRADH VMDNFTLRTF QPGGSMSMPM ASNVRRTTEG ARVAATLQWQ PDWQLETGLD
AQRSPHDKRS GTPSVPYDSK PWMRDAKFEN LGAFAELSWQ AQADTRWVGG LRLDRAEAWR
YPAPSGMGGM APAAGADHRT RSAMPSGFVR WERTLAPQGA LVYAGLGHVQ RFPDYWELIS
PGNGAASAGN AFATLRPEKT TQLDMGAQWK GADWQLWTSA YVGVVRDYIL FDYTGMKSAV
RNVDARTAGL ELGASQRLGT AWTAQGTLAY SWGRNTSEGR PLPQMPPLEA RLGLEYAQGP
WSAGGLWRLV AAQHRHANGQ GNVVGRDLGA SAGFGVLSLH AGYRINAQLK LAAGVDNLLD
KNYAEHLNLA GNAGFGYPGG VRINEPGRTL WLRADLQF
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