Gene Dtpsy_3411 details

Gene Information

• Locus tag: Dtpsy_3411
• ID: 7383650
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3652749
• End bp: 3653294
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643656732
• Product: single-strand binding protein
• Protein accession: YP_002554838
• Protein GI: 222112574
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0856708
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATCCG TGAACAAAGT CATCATCGTC GGCAACCTGG GGCGCGACCC CGAGATGCGC 
ACCTTCCCCA GCGGCGACCA GGTCGCCAAC GTGCGCATCG CCACGACGGA CCGCTGGCGC 
GACAAGAACA CCGGCGAGAA CAAGGAAGCC ACCGAATGGC ACAGCGTGGT CTTCAACGGC 
CGCCTGGCCG AGATCGTGGG CCAGTACCTG CGCAAGGGCT CCCAGATCTA CGTGGAAGGC 
AGCCTGCGCA CGCGCAAATG GACCGACCAG AGCGGCCAGG AGCGCTACAC CACCGAAATC 
CGCGCCGACA CCATGCAGAT GCTGGGCAGC CGCCAGGGCA TGGGCGGCGG CCAGGGCGGC 
GGCTATGACG ACAGCGGCTA CGGCGACAAC GGCGGCGGTG GTGGTGGCGG CTACGAGGCC 
CCGCGCCGCG CCGCACCCGC GCCGCGCCCC GCCCCCCCCG CGGCCCGCCC CGCACCCGCG 
CCCGTGGCAC AGCCGCCGCG CGCCGCATCG GGCTTTGACG ACATGGACGA CGACATTCCG 
TTCTGA 

 

Protein sequence

MASVNKVIIV GNLGRDPEMR TFPSGDQVAN VRIATTDRWR DKNTGENKEA TEWHSVVFNG 
RLAEIVGQYL RKGSQIYVEG SLRTRKWTDQ SGQERYTTEI RADTMQMLGS RQGMGGGQGG 
GYDDSGYGDN GGGGGGGYEA PRRAAPAPRP APPAARPAPA PVAQPPRAAS GFDDMDDDIP 
F