| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3408 |
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| Symbol | |
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| ID | 7383647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3646324 |
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| End bp | 3647817 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643656729 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_002554835 |
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| Protein GI | 222112571 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.704891 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTGC TAGACCCGAC CGTCATCACC TTCGGCATCT ACCTGCTGGC CATGCTGTTC
ATCGGCTGGC TGGGCTACCG CGCGACGACC GACCTCTCCG ACTACATCCT GGGCGGGCGC
AGCCTGGGCA GCTTCGTCAC TGCGCTGTCG GCCGGCGCGT CCGACATGAG CGGCTGGCTG
CTCATGGGCC TGCCCGGCGC GGTGTACCTG AGCGGACTGA GCGAGGCGTG GATCGCCATC
GGCCTGACCA TCGGCGCCTA CCTCAACTGG CGCCTCGTGG CCGCGCGGCT GCGCCTGTAC
ACCGAGCGCA CCAACAACGC CCTCACGTTG CCCGACTACC TGGCCTCGCG CTTCGAGGAC
GGCGCGAACG TGCTGCGCCT GGTGACCACG GCGGTGATCC TGGTGTTCTT CACCATCTAC
TGCGCCTCGG GCGTGGTGGC GGGTGCGCGC CTGTTCGAGA GCATGTTCGG CCTGCCCTAC
CAGACAGCCC TGTGGGTCGG GGCGCTGTGC ACCATCGCCT ACGTGTTCAT CGGTGGCTTC
CTGGCGGTGA GCTGGACGGA CACCATCCAG GCCTCGCTGA TGATCACCGC GCTGATCCTG
GCGCCCGTGG TGGCCTACTT CGCCGTCACC GGCGAACTGC AGGCGGGCCA AAGCCTCACC
GAGATGATCG GTGCGCAGAA GCTCGACCTG ATGCACAACG CCAGCGTGAT CGGCGTGGTC
TCGCTCATGG CCTGGGGCCT GGGCTACTTC GGCCAGCCGC ACATTCTGGT GCGTTTCATG
GCGGCGGATT CGGTGGCCTC CATCCCGCGC GCGCGCCGCA TCGGCATGAC CTGGATGGTG
CTGTGCCTGG GCGGCGCGGT GGCTGTGGGC CTGGTCGGCA TCCCGTACTT CGCGGTGCAC
ACGCAGCAGG CCGCCGGCGT GCAGGCCAAT GCCGAGACGG TGTTCATCGA GATCGCGCGC
CAGCTCTTCA ACCCCTGGAT CGCCGGCCTG CTGCTGGCGG CCATTCTGGC GGCGGTGATG
AGCACGCTGT CGTGCCAGCT GCTGGTGTGC TCCAGCGCGC TGACCGAGGA CATCTACCGC
GTGTTCCTGC GCAAGAACGC CACGCAGCGC GAGCTGGTGT GGGTGGGCCG AGCGATGGTG
TTCGCCATCG CCGTGGTGGC GATCGTCATC GCGGGCAACC CCAACAGCCG CGTGCTGTCG
ATGGTGAGCT ACGCCTGGGC GGGCTTCGGC GCGGCATTCG GGCCAGTCAT CCTGCTGTCG
CTGTTCTGGC GCGGCATGAC GCGCAACGGC GCGCTGGCCG GCATCGTGGT CGGTGCCGTG
ACGGTGGTGG TGTGGAAGCA GGGCGGCTGG CTGGGGCTGT ACGAGATCGT GCCCGGCTTC
GTTCTGGGCG CGCTGGCCGT GGTGCTGGTG AGCAAGCTGG GCAAGCAACC CTCGCCCGCC
ATGCTGCAGC GCCACGACGC GGTGGACGCC GAGATGGCGC GTCTGCAAGC CTGA
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| Protein sequence | MNLLDPTVIT FGIYLLAMLF IGWLGYRATT DLSDYILGGR SLGSFVTALS AGASDMSGWL
LMGLPGAVYL SGLSEAWIAI GLTIGAYLNW RLVAARLRLY TERTNNALTL PDYLASRFED
GANVLRLVTT AVILVFFTIY CASGVVAGAR LFESMFGLPY QTALWVGALC TIAYVFIGGF
LAVSWTDTIQ ASLMITALIL APVVAYFAVT GELQAGQSLT EMIGAQKLDL MHNASVIGVV
SLMAWGLGYF GQPHILVRFM AADSVASIPR ARRIGMTWMV LCLGGAVAVG LVGIPYFAVH
TQQAAGVQAN AETVFIEIAR QLFNPWIAGL LLAAILAAVM STLSCQLLVC SSALTEDIYR
VFLRKNATQR ELVWVGRAMV FAIAVVAIVI AGNPNSRVLS MVSYAWAGFG AAFGPVILLS
LFWRGMTRNG ALAGIVVGAV TVVVWKQGGW LGLYEIVPGF VLGALAVVLV SKLGKQPSPA
MLQRHDAVDA EMARLQA
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