Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3401 |
Symbol | pgk |
ID | 7383640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3637896 |
End bp | 3639089 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643656722 |
Product | phosphoglycerate kinase |
Protein accession | YP_002554828 |
Protein GI | 222112564 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.780201 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACATCC TTCGCTTTTC CGACCTTTGC GCCCAGGGCC AGGCCCGTGG CCAGCGCGTG TTCATCCGTG CCGACCTGAA CGTGCCGCAA GACGACGCCG GCCGCATCAC CGAGGACACG CGCATCCGTG CCTCCGTGCC CTGCATCCAG ATGGCGCTGG AAGCCGGCGC CGCCGTGATG GTGACCAGCC ACCTGGGCCG CCCCACCGAG GGCGAGTTCA AGCCCGAGGA TTCGCTGGCC CCGGTGGCCC AGCGCCTGTC CGAACTGCTG GGCCGCGAGG TGCCGCTGGT GGCCGACTGG GTGGACGGCG TGCAGGTCGC GCCCGGCCAG GTCGTGCTGC TGGAAAACTG CCGCGTGAAC AAGGGCGAGA AGAAAAACAA CCCCGAGCTG GCGAAGAAGA TGGCCCAGCT GTGCGACATC TACGTGAACG ACGCCTTCGG CACCGCCCAC CGCGCCGAGG GCACGACCTA CGGCATCGCC GAGTACGCGA AGGTGGCCTG CGCCGGCCCG CTGCTGGCCG CCGAGATCGA CGCCATCCAG ACCGCGCTGG CCAACCCGAA GCGCCCGCTG GTCGCCATCG TGGCCGGCTC CAAGGTCTCG ACCAAGCTGA CCATCCTGCA AAGCCTGTCC AAGAACGTGG ACGGCCTGGT GGTGGGCGGC GGCATTGCCA ACACCTTCAT GCTGGCGGCC GGCCTGCCCA TCGGCAAGAG CCTGGCCGAG CCCGACCTGG TGAACGAAGC CAAGGCCGTG ATCGCCGCCA TGGCCGCGCG CGGCGCCGAG GTGCCGATCC CCACCGACGT GGTGGTCGCC AAGGCCTTCG CGGCCGACGC GCCCGCCACC GTGAAGAAGG CCAGCGAAGT GGCCGAGGAC GACCTGATCC TGGACATCGG CCCCGAGACG GCGGCCAAGC TGGCCGCGCA GCTCAAGGCC GCGGGCACCA TCGTCTGGAA CGGCCCCGTG GGCGTGTTCG AATTCGACCA GTTCGCGGGC GGCACCAAGG CCATCGCACA GGCCATCGCC GAATCCAGCG CCTTCAGCAT CGCCGGCGGT GGCGACACCC TGGCGGCGAT TGCCAAGTAC GGCATCGAGA AGGACGTGGG CTACATCTCC ACCGGCGGTG GCGCGTTCCT GGAGGTGCTG GAGGGCAAGA CCCTGCCGGC CTTCGAAATA CTGCAAAAGC GCGCGGCAGG CTGA
|
Protein sequence | MHILRFSDLC AQGQARGQRV FIRADLNVPQ DDAGRITEDT RIRASVPCIQ MALEAGAAVM VTSHLGRPTE GEFKPEDSLA PVAQRLSELL GREVPLVADW VDGVQVAPGQ VVLLENCRVN KGEKKNNPEL AKKMAQLCDI YVNDAFGTAH RAEGTTYGIA EYAKVACAGP LLAAEIDAIQ TALANPKRPL VAIVAGSKVS TKLTILQSLS KNVDGLVVGG GIANTFMLAA GLPIGKSLAE PDLVNEAKAV IAAMAARGAE VPIPTDVVVA KAFAADAPAT VKKASEVAED DLILDIGPET AAKLAAQLKA AGTIVWNGPV GVFEFDQFAG GTKAIAQAIA ESSAFSIAGG GDTLAAIAKY GIEKDVGYIS TGGGAFLEVL EGKTLPAFEI LQKRAAG
|
| |