| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3372 |
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| Symbol | |
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| ID | 7383611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3610144 |
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| End bp | 3611316 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643656693 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002554799 |
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| Protein GI | 222112535 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0461986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGCC TGACACCGAC CCGCACCCTG ATCGCCCTGG CTTTGCTGGG GCTTGCCGCG
ACCACCGCCG TCCTGCTCGG CAGCGGCCCC ACCCATGCCG AGGACTCCGC ACAGGCCGAG
GGGCCGCGCC CCGCCCTCAC CGTGGCCACC ACCCAACCGC AGCGCGGCAA CGTGACCCAG
CGGCTGCCGG CCAACGGCAA CGTGGCCGCG TGGCAGGAGG CCAGCATTGG CGCCGAGGTG
AGCGGCCTGC GGCTGACCGA CGTGCGCGTG AACGTGGGCG ACACGGTGCG CGCCGGCCAG
GTGCTGGCCA CCTTCGCGCC CGAGACCATC GAGGCCGACG TGGCCCAGGC CCGCGCCAGC
CTGCTGGAGG CCCGCGCCGC CCAGGCCGAG GCGCAGGCTA ATGCCGACCG CGCCAACACC
CTGAGCGCCT CGGGTGCACT GAGCCAGCAG CAGATCCAGC AATACGCCAC CGGCGCGCAG
ACCGCGCAGG CCCGCGTGGC GGCGGCACAG GCGGCGCTCA ACGCCCAGCA GCTGCGCCTG
AAACACACCC AGGTATTGGC GCCCGACAGT GGCGTGATCT CCGCGCGCAC GGCCACCGTG
GGCGCGGTGG TGGGTGCAGG CACCGAGCTG TTTCGCATGG TGCGCAAGGG CCGGCTGGAG
TGGCGCGCGG AGGTCACCTC CAGCGAGCTG CCCCGCATCC GTCCCGGTGC CAAGGCGGTG
GTGACGGCCG CCAGCGGCGC GCAGGTGGAA GGCACGGTGC GCATGCTGGC CCCGACGGTG
GACCCGCAGA CGCGCAATGC GCTGGTGTAC GTGGACCTGC CGGCGCACCC CGAGATAAGG
GCGGGCATGT TCGCGCGCGG CGAGTTCCTG CTGGGCGAGC GCGACGCGCT GCTGGTGCCC
CTGTCGGCCG TGGTGGTGCG CGACGGCTTC TCGCACGTGT TCGAGGTAGG CACGGACTCG
CGCGTGGCCA TGCACCGCGT GCAGACCGGT GAGCGCAGCG GCGAGCGCGT GGCCATCACC
TCGGGCCTGG CGCCCCAGGC GCGCATCGTG GCGCGAGGCG GCGCCTTCCT GAACGACGGC
GACTTGGTGC GCGTGCAGGC TGCGCCTGCC GCAGATTCAG CACCAAAAGA GGCTGCAGCG
CCCGTCCCTC AAGCGCAAGC AGCTAGCAAA TAA
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| Protein sequence | MPRLTPTRTL IALALLGLAA TTAVLLGSGP THAEDSAQAE GPRPALTVAT TQPQRGNVTQ
RLPANGNVAA WQEASIGAEV SGLRLTDVRV NVGDTVRAGQ VLATFAPETI EADVAQARAS
LLEARAAQAE AQANADRANT LSASGALSQQ QIQQYATGAQ TAQARVAAAQ AALNAQQLRL
KHTQVLAPDS GVISARTATV GAVVGAGTEL FRMVRKGRLE WRAEVTSSEL PRIRPGAKAV
VTAASGAQVE GTVRMLAPTV DPQTRNALVY VDLPAHPEIR AGMFARGEFL LGERDALLVP
LSAVVVRDGF SHVFEVGTDS RVAMHRVQTG ERSGERVAIT SGLAPQARIV ARGGAFLNDG
DLVRVQAAPA ADSAPKEAAA PVPQAQAASK
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