Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3370 |
Symbol | |
ID | 7383609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 3607990 |
End bp | 3608676 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643656691 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002554797 |
Protein GI | 222112533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0063882 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGCGC TCAAACTGTT TTCCGAACAG GGCTACGCCA AGACCTCGAT CCGCGCGATC GCCGCCGAGG CCCAGGTCAA CGTGGCCTCG GTGAGCTACT ACTTCGGCGA CAAGGCCGCG CTGTACGCGG CGCTGTTTTC CGCGCCCTTC GGCTCGCTGC AATCGCTGGT GCCCGACTTC ATGCGCCCCG GCCTGTCCCT GCGCGCCGCG CTGCACTGCT TCTACCAGGG CGCGCTGGGG CCGCTGCACG ACGGCGAGAT GGCACGCCAG GTGGTGCGGC TGCACATCCG TGAAATGCTG GAGCCCACGG CGCAGTGGCA GATCGAGCTG GAAAAAGACG TGCGCGCACC CAACGAGGCC ATGGCCGCGC TGCTGTGCCG GCACCTGGGG CTGCCGCAGG CCGACGACGA CCTGCACCGC CTCACGCTCA CCGTCACCGG ACTGGCCTTT CAGCTGTGGA GCCACCAGGA AGTGGTGTGC GCCATGCAGC CACAGCTGCT CGCATCCCCG GCGGCCGTGG ACCAGTGGGC GGAACGCCTG GCCGACTACG CCATGGCCAT GGTGGCCACC GAGCGGCGCC GGCGTACGCG CGCTCAGCCT GTCCGCCCTT CTACTCCAGC CTCGCCCTCC CCTTCGACCT CTTCCACCCC CCGCCGGCGC ACCGCCCGCA GGTCTACCGC ACCATGA
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Protein sequence | MAALKLFSEQ GYAKTSIRAI AAEAQVNVAS VSYYFGDKAA LYAALFSAPF GSLQSLVPDF MRPGLSLRAA LHCFYQGALG PLHDGEMARQ VVRLHIREML EPTAQWQIEL EKDVRAPNEA MAALLCRHLG LPQADDDLHR LTLTVTGLAF QLWSHQEVVC AMQPQLLASP AAVDQWAERL ADYAMAMVAT ERRRRTRAQP VRPSTPASPS PSTSSTPRRR TARRSTAP
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