| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3288 |
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| Symbol | |
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| ID | 7385187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3514693 |
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| End bp | 3516192 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643656611 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_002554717 |
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| Protein GI | 222112453 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGGC GGGCGGCCAT GGCGCCCCCT AAACTCGCCG CCATGTCGTT TTCTTTCCTT
GGGCAGGCCC GCCGCCTGCG CTGTGCGGCC GGGTGGGCGC TGGCCCTGGC CTTCCTGACA
CCCTGGGCGG GCGCCCAGCC TGTGCCCGCC GATGCATCGG CCTTGCCCCC TTCCGTCGAG
GCCGCGCTGC AGCGCGCCAA GGTGCCGCGC GAAGCACTCT CCGCCTTGGT GGTGGAGGTC
GAGGGGCGCC AGCCGCGCCT GGCCCACCGC GCCGATGCGC CCGCCAACCC GGCCTCGGTC
ATGAAGCTGG TCACGACGTA TGCGGCGCTG GACCTGCTGG GGCCGGCATT CACCTGGGAC
ACGCCCGTGT ACCTGGACGC CGCGCCCCAA GGCGGCAGCC TGCGCGGCAA CGTGTACATC
AAGGGGCAGG GCGACCCCAA GCTGGTGGTG GAGCGCCTGT GGTTGCTCAT GCGCCGCCTG
CGTGCGACGG GGGTCGAGGT GATCCTGGGC GACATCGTGC TGGACCGCAG CGCCTTCGCG
CTGCCGGCGC ACGATCCGGC GCTGTTCGAC GGCGAGCCCT GGCGCCCCTA CAACGCCGCG
CCCGACGCGC TGCTGCTCAA CTACAAGGCG GTGTCCATCG GTTTCGTCCC GGATCTGGCG
GCCGGCGTGG CGCGGCTGCG CTATGAGCCG CCGCTGGCCC AGGTGGAACT GCCCGCCACC
GTGCCGCTGG CGGCGCAGGG CGCGGCCTGC GGCGATTGGC GTGCAGGGCT GCGGGCGGAT
TTCGCGGACC CTGCGCGCAT CGCCTTCCAG GGCGTGTACC CGGCGGCCTG CGGCGAACGC
GAGTGGTCCA TCGCACCGGC CGACCCGGGC GGCTACGCGG CGCGCGCGGT GGAAGGCATG
TGGCGCGAAC TGGGCGGCAA GCTCACCGGC CGCGTGCGCG ACGGCAAGGT GCCCGCGGGG
CTGGCACCGG CATTCGGCAG TACCTCGCCG CCGTTGTCGG AGGTGGTGCG CGACATCAAC
AAGTACAGCA ACAACGTCAT GACGCAGCAG GTGTTTCTGA CGCTGGGGCT GCAAAAAGCC
GGCGCAGGCA GCTTCGACCA GGCGCGCAGC GTGCTCGCAC AGTGGTGGCG CCAGCGCCTG
GGCGCCGCCG GGATGCCGGT GGTGGACAAC GGCGCCGGCT TGAGCCGCGA GGCGCGCGTG
AGCGCGCGGG CGCTTGCGCG CATGCTGCAG CATGCCTGGG CGTCGCCGGT GATGCCGGAA
TTCATGGCAT CGCTGCCCAT TGCCGGGGTG GACGGGACGC TGCGCCGCCG CCAGGGCCAG
GCTGCGGGCT TCGCGCACCT CAAGACGGGT GCGCTGCGCG ACGTGGTGGC GCTGGCCGGC
TATGTGCATG CCGCGAGCGG CCGGCGCTAT GTGCTGGTGG GCTTCGTCAA CCACCCAAAT
GCCTCCGCGG CACGACCGGC CCTGGACGCG CTGGTGGACT GGGCCGCGAG CGACCGCTGA
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| Protein sequence | MAGRAAMAPP KLAAMSFSFL GQARRLRCAA GWALALAFLT PWAGAQPVPA DASALPPSVE
AALQRAKVPR EALSALVVEV EGRQPRLAHR ADAPANPASV MKLVTTYAAL DLLGPAFTWD
TPVYLDAAPQ GGSLRGNVYI KGQGDPKLVV ERLWLLMRRL RATGVEVILG DIVLDRSAFA
LPAHDPALFD GEPWRPYNAA PDALLLNYKA VSIGFVPDLA AGVARLRYEP PLAQVELPAT
VPLAAQGAAC GDWRAGLRAD FADPARIAFQ GVYPAACGER EWSIAPADPG GYAARAVEGM
WRELGGKLTG RVRDGKVPAG LAPAFGSTSP PLSEVVRDIN KYSNNVMTQQ VFLTLGLQKA
GAGSFDQARS VLAQWWRQRL GAAGMPVVDN GAGLSREARV SARALARMLQ HAWASPVMPE
FMASLPIAGV DGTLRRRQGQ AAGFAHLKTG ALRDVVALAG YVHAASGRRY VLVGFVNHPN
ASAARPALDA LVDWAASDR
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