Gene Dtpsy_3275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3275 
Symbol 
ID7385174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3501618 
End bp3501971 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content58% 
IMG OID643656598 
Productsigma 54 modulation protein/ribosomal protein S30EA 
Protein accessionYP_002554704 
Protein GI222112440 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGA CGATCAGCGG CCATCACCTT GAAGTGACCC CCGCCTTGCG CAGTTATGTG 
ACGTCCAAGT TGGACCGCAT TACCCGCCAC TTCGATCAGG TGGTGGATGT CAAGGTGCTA
CTGACCGTGG AGAAGCAGAA GGAAAAGGAA AAGCGCCAGC GCGCTGAATG CACCGTGCAT
GTGAAAGGAA ATGACCTGTT CGTGGAAAGC ACCCATTTCG ACCTGTATGC CGCCGTGGAC
GAATTGATGG ACAAGCTCGA CCGCATGGTC GTGCGCCACA AGGACCGTCT GCAGGACCAC
CAAGCCGGCC TACGCCGCGC CACCATTCAG GCAGCAGCTG CCGCCACGGC TTGA
 
Protein sequence
MNLTISGHHL EVTPALRSYV TSKLDRITRH FDQVVDVKVL LTVEKQKEKE KRQRAECTVH 
VKGNDLFVES THFDLYAAVD ELMDKLDRMV VRHKDRLQDH QAGLRRATIQ AAAAATA