Gene Dtpsy_3116 details

Gene Information

• Locus tag: Dtpsy_3116
• ID: 7383339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3328957
• End bp: 3329556
• Gene Length: 600 bp
• Protein Length: 199 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 643656432
• Product: hypothetical protein
• Protein accession: YP_002554549
• Protein GI: 222112285
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.809054
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCCTGG TTGAATTCAC CGCCCTGCTG GTGCTGGCCA CCGCCATGAG CTTTACCCCC 
GGGCCCAACA CCACCCTGTC CACCGCGCTG GCCGCCAACC GCGGCCTGCC CGCCGCCATG 
CGCTTCGTGG TGGCGGTGCC CGTGGGCTGG AGCCTGCTGC TGGTGCTGTG CGCCGCCGGG 
CTGGGTGCGG TGGTGGTGGC GGTGCCGGCG CTGCGCTGGG CCATCAAGGC CCTGGGCATC 
GGCTACCTGC TGTGGCTCGC GTTCAAGCTG TCGAACACGG GCCGCCTGTC CGAGGCCGAT 
GCGGCACGCC TGTCGGTGGG CTTCTGGCAG GGCGTGGCGC TGCAGTTCGT GAACATCAAG 
GCCTGGCTGC TCGCGCTGAC CATCGTGGCC GGCTGGGTCA TCGGGCGCGA CGACAGCCTG 
CAGCGCATGG CCGTGGTGCT GCCGGCAATG GCCTTCTTCG CACTGACCAG CAACTTCACC 
TATGCGGCCA CCGGCGCGCT GCTGCGCCAC TGGCTGGCCC ACGGGCAGCG CCTGCTGTGG 
TTCAACCGCA CCATGGCGGT GGTGCTGCTG GCCACGGCGC TGTGGATGGT GGCCGCATGA 

 

Protein sequence

MPLVEFTALL VLATAMSFTP GPNTTLSTAL AANRGLPAAM RFVVAVPVGW SLLLVLCAAG 
LGAVVVAVPA LRWAIKALGI GYLLWLAFKL SNTGRLSEAD AARLSVGFWQ GVALQFVNIK 
AWLLALTIVA GWVIGRDDSL QRMAVVLPAM AFFALTSNFT YAATGALLRH WLAHGQRLLW 
FNRTMAVVLL ATALWMVAA