Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_3085 |
Symbol | |
ID | 7383308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3294097 |
End bp | 3295530 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643656401 |
Product | flagellar hook-associated 2 domain protein |
Protein accession | YP_002554518 |
Protein GI | 222112254 |
COG category | [N] Cell motility |
COG ID | [COG1345] Flagellar capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.896986 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCT TTTCATCGAT TGGCGTCGGC CTGGGCGGCA ACGTGGATGT GAACGCGCTC ATCCAGGCCT CCGTGGATGC GGTCAAGCTT CCCATCTCCC GCACCAATGG CTTGAACGAC CAGGCCAAGT TCACACAGTC CAAGATTTCA ACATTTGGAC AGCTCAAGTC CATGGTCTCC ACCCTGCAGA CGGCGGCGAG CAAGCTGACG AGTGTGACGG GATGGAATGC CGTCAGTGTC GCGTCTTCGG ACTCCAGCGC CGTTTCGGCG ACGGCGATCG GTGGGACGGT GGAAACGAAC TTTGGAGTTG AAGTGCAGCG CCTGGCCAAG GCGCAGCTGT CCACTTCCGC GGCCCTGCAG CCGGTGGGCG GCAAGCTGGG GGCCGGGACG CTGAAGCTGG AAGTCGGGCG CTGGGACGCA GGAGGGGGTG GGGCTTTCAC CGCTTCGGAT AGCGTTGTCG GGCTGGATAT CACTGTAAGC GCCAACGACA CATTGGCGGA CATTGCAGGA AAGATCAACG GCTCCAATGG GAGCGTCACA GCCACCATAT TGACGGACGC CTCGGGCGAG CGCCTCATGC TGCGCAGCAA GGCCACAGGC GAAGAGTCGG GTTTTCGGCT GTCCGCAACG GATGCGGATG GCCAGTACGC TGATGGCGCT GGTTTGTCGC GCCTGGCTAC GGGCATGGCC ACCGATTACG GGGCTAATGC GTTGGCCACG ATCAATGGCT TTGAGGTGAC ATCGCCCACC AATACTTTTG CCAATGCGGT GGCGGGCGTA ACCTTCAAGG CCGAGAAGGT GACCACCGCC GCCGTGCAGA TTACCGTGAC CAAAGACGCG GCTGCGGTGA AAAAGAACAT CGAGGACTTT GTCATCGCCT ACAACGCGGC CAACCAGGCG CTGAGCGATC TCACCAGCTA CGACCAGGCC ACCAAGACGG CCGGACTGTT GCAAGGCGAC TCAACTGCGG TGGCGCTGCA GAACACGTTG CGCAATGTGG TGCAGTCGCT CTCCAGCAGC ACGGGGGCGT TCCGCACACT GTCCGATATC GGGGTGGGTG TCATCAAGGG GGGGGACTTG TCGATAGACA GCACCAAGCT CGATACTGCC TTGAACGACC CCGCAGCTCT CAAGGCCCTT TTCCTGGGAG CTGACGGCCA CGAGTCCGCC ACGGACGGCG TGGCAGAGAA AATCAAGGCT GCAACCTCCA AGATGCTGGA TTCCGATGGT TTCTTTGCCG CCAAAGACAC CTTGCTGCAG AACGCCCTGA AGCGTAACGC GAAGGAAATC GAGCGCATCA ATGATCGGGC GGACAGCACG GAAACGCTGT TGAAGGCGCG CTATACGGCG CTGGACTCCA GAATGAGCCA GCTCAATGCC CTTAACGCCT ACATCGCCCA GCAGGTCACC ACCTGGAACA AGTCCTCGGG CTGA
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Protein sequence | MASFSSIGVG LGGNVDVNAL IQASVDAVKL PISRTNGLND QAKFTQSKIS TFGQLKSMVS TLQTAASKLT SVTGWNAVSV ASSDSSAVSA TAIGGTVETN FGVEVQRLAK AQLSTSAALQ PVGGKLGAGT LKLEVGRWDA GGGGAFTASD SVVGLDITVS ANDTLADIAG KINGSNGSVT ATILTDASGE RLMLRSKATG EESGFRLSAT DADGQYADGA GLSRLATGMA TDYGANALAT INGFEVTSPT NTFANAVAGV TFKAEKVTTA AVQITVTKDA AAVKKNIEDF VIAYNAANQA LSDLTSYDQA TKTAGLLQGD STAVALQNTL RNVVQSLSSS TGAFRTLSDI GVGVIKGGDL SIDSTKLDTA LNDPAALKAL FLGADGHESA TDGVAEKIKA ATSKMLDSDG FFAAKDTLLQ NALKRNAKEI ERINDRADST ETLLKARYTA LDSRMSQLNA LNAYIAQQVT TWNKSSG
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