| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3069 |
|---|
| Symbol | |
|---|
| ID | 7383292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3281543 |
|---|
| End bp | 3282286 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643656385 |
|---|
| Product | flagellar biosynthetic protein FliR |
|---|
| Protein accession | YP_002554502 |
|---|
| Protein GI | 222112238 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.159103 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGC TGTCGCCGGT GCTGTGGCCG TTCCTGCGCG TGCTGGCGCT GTTCACGTCG
GCGCCGGTGT TCTCGATGCG CGTGATCCCG GTGCGCACGC GCATCGGGCT GGCCTTTTTG
GTGGCGGTGT GCGCGCAGGC AGTGCTGCCC GAGCAGCCGG TCATCAGCCT AAACAGCCGC
GAGGCTGCGG GCGCGGTGGT GCAGCAGGTG GGGATTGGCC TGGCGATGGG CTTCGCTGTG
CGTCTGGTGT TCGCGGCCGT GGAGCTGGCC GGCGAAATCA TCGGCCTGCA GATGGGCCTG
AACTTCGCTT CATTCTTCGA CCCCGCGAGC AATGCGCAGG TGAGCGCGGT GGCGCGCTTC
TTCGGCAACA TCTCCATGCT GCTGTTCGTG GTGATCAACG GCCACCTGAT GGTGTTGATG
GCCGTGGTCA AGAGTTTCGA CAGCTTCCCC GTGGGCGGCA ACTTTCTGCA GGCCATCGGG
CAGATGCGGC TGCACGAGCT GGGTGCTTCG CTGTTCTCCA GCGCTTTGTG GATCGCGTTG
CCCATGATTG CGCTGCTGCT GTTCGTGAAC CTGACCCTGG GCATCATCTC GCGCGTGGCG
CCGCAGATGA ACATCTATGC CGTGGGCTTC CCGGTCACGC TCACCGTGGG CATGCTGGGC
ATCACGGCCA CCCTGCCGAT GCTGGAGCAG CCCATGCTGG CGCTGCTGCA GCAGTCCATC
GACCTGTTCG CCGCGCCGCG TTAG
|
|---|
| Protein sequence | MAWLSPVLWP FLRVLALFTS APVFSMRVIP VRTRIGLAFL VAVCAQAVLP EQPVISLNSR
EAAGAVVQQV GIGLAMGFAV RLVFAAVELA GEIIGLQMGL NFASFFDPAS NAQVSAVARF
FGNISMLLFV VINGHLMVLM AVVKSFDSFP VGGNFLQAIG QMRLHELGAS LFSSALWIAL
PMIALLLFVN LTLGIISRVA PQMNIYAVGF PVTLTVGMLG ITATLPMLEQ PMLALLQQSI
DLFAAPR
|
|---|
| |