Gene Dtpsy_3059 details

Gene Information

• Locus tag: Dtpsy_3059
• ID: 7383282
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: +
• Start bp: 3271198
• End bp: 3273084
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643656375
• Product: ABC transporter related
• Protein accession: YP_002554492
• Protein GI: 222112228
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTGA TTACTCTGAT GAACGCCCAG CTGGCGTTCG GGCATGTAGC GCTGTTGGAC 
CATGCCACGT TCGCGCTGGA ATCCAATGAG CGCGTGGGAC TGATTGGGCG CAATGGTGCG 
GGGAAGTCGT CACTTCTGAA AATTCTGGGC GGCTTGGCCC ATGCAGATGA CGGCACACTG 
AGTGTCCAGC AGGGCCTGCG CATTACCTAT GTGGCCCAAG AGCCTGATCT ACAGCCTGAG 
GACACCGTCT TCCAATCCGC CGCCCGCGGG TTGGGCGAAG CGATCGCGCT GCGGGAACAA 
TACCTGGGGG GCGCCACAGG CCTTGATTTG GATGCATTGC AGTCTCAGAT CGAGGCTTAT 
GACGCCTGGA ACTGGGAGCA ACGGGTAGAG GAAACTTTGC ACCGCCTGCA CCTTGCCCCG 
GAGGCCATCG TGGGCACCCT CTCGGGAGGG ACACGCAAGC GAGTCGCGCT GGCGCAAGCC 
CTGGTGGCCC GCCCGGACGT GCTGCTGCTG GACGAGCCCA CCAACCACCT AGACCTCGAT 
TCCATAGAGT GGCTTGAAGA ACTGCTACTC GACTTCAAGG GTGGCATCGT CACGATCACT 
CACGACCGTG CGTTCCTCGA CCGGATCGCC ACGCGCATCG TGGAGCTCGA CCGAGGTCAG 
TTGCGCTCCT ATCCCGGCAA CTTTGCGCAG TACGTGGCGC AAAAGGAAGA GCAGTTGGCG 
CAAGAGGCCG TCATCAATGC ACGGGCGGAC AAGCTGCTGG CGCAGGAGGA AGTCTGGATC 
CGCAAGGGCG TGGAGGCGCG CCGCACGCGC AGCCAGAGCC GCATCAGTCG ACTGGAGACC 
CTGCGCGCCA ATCGCGCCGC GCGCCGCGAC GCGGTTGGCA GCGTCAAGAT GGACATCGCC 
TCGGGCAGCC AGAACAGCTA CCAGGGGAAG ATCATCGCCG AGCTGGCGCA CGTAACCAAA 
ACCTTTGGCG ACAAAGCCAT CGTGCGGGAC TTCAGCGCCA CCATCCTGCG GGGCGACAAG 
GTGGGTTTGA TCGGCCCCAA CGGTGCGGGG AAAACCACCC TGCTCAAGCT CATCCTGGGT 
GAACTGGAGC CTGACAGCGG TACGGTACGC CGCGGCGCCA ACCTGCAGGT CGCGTATTTT 
GACCAGATGC GCCACAGTAT CGACATGGAT GCCACGCTGG AGGACTTCAT CAGTCCTGGC 
AGCGAGTGGA TCGAGATCGG CACGCAGCGC AAGCATGTGA AGAGCTACCT CGGCGATTTC 
CTGTTCTCCC CGGCCCGGGC GCACTCCCCC GTGCGCTCGC TGTCCGGCGG CGAGCGCAAC 
CGCCTGCTGC TGGCACGGCT GTTTGCGCGG CCCGCCAACG TGCTGGTGCT GGACGAGCCC 
ACCAACGACC TGGACATTGA CACCCTCGAG CTGCTGGAGG AGCTGCTGCA GGATTACGAC 
GGCACGGTGT TCGTGGTGAG CCACGACCGC ACCTTCTTGG ACAACGTGGT CACCAGCACC 
CTTGCGTTCG AGGGGAATGG CCTGTGGCGG GAGTATGAGG GCGGCGTGCA GGACTGGCTC 
GCCCAGTCGA ACCGCAGCCG TTCACTCGCG GGCGGACCGG CGGCTCCTGA GAAAAATACA 
AGCAAAAACG AGCCAAAACG CCCGTCAGAC AAGCGCGATC AGCTACAAAA AAAGAAGCTT 
AGCTACAAGG AGCAGCGTGA ACTGGAGCAG CTACCTGCCC AGATCGACGC ACTGGAGGCC 
GAGCAAAAGG CGATCCGCGA AGAATTGGCG GACGGCAGCC TGTACAGCCG AGACGGCGCG 
CGGGCGACGG CGCTGCATAC GCGTGACGGG GAGATCGAAG ATCTGTTGAT GCAGGCGCTG 
GAGCGCTGGT CCGCGCTCTC GTCCTGA 

 

Protein sequence

MALITLMNAQ LAFGHVALLD HATFALESNE RVGLIGRNGA GKSSLLKILG GLAHADDGTL 
SVQQGLRITY VAQEPDLQPE DTVFQSAARG LGEAIALREQ YLGGATGLDL DALQSQIEAY 
DAWNWEQRVE ETLHRLHLAP EAIVGTLSGG TRKRVALAQA LVARPDVLLL DEPTNHLDLD 
SIEWLEELLL DFKGGIVTIT HDRAFLDRIA TRIVELDRGQ LRSYPGNFAQ YVAQKEEQLA 
QEAVINARAD KLLAQEEVWI RKGVEARRTR SQSRISRLET LRANRAARRD AVGSVKMDIA 
SGSQNSYQGK IIAELAHVTK TFGDKAIVRD FSATILRGDK VGLIGPNGAG KTTLLKLILG 
ELEPDSGTVR RGANLQVAYF DQMRHSIDMD ATLEDFISPG SEWIEIGTQR KHVKSYLGDF 
LFSPARAHSP VRSLSGGERN RLLLARLFAR PANVLVLDEP TNDLDIDTLE LLEELLQDYD 
GTVFVVSHDR TFLDNVVTST LAFEGNGLWR EYEGGVQDWL AQSNRSRSLA GGPAAPEKNT 
SKNEPKRPSD KRDQLQKKKL SYKEQRELEQ LPAQIDALEA EQKAIREELA DGSLYSRDGA 
RATALHTRDG EIEDLLMQAL ERWSALSS