| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3037 |
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| Symbol | |
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| ID | 7385483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 3240206 |
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| End bp | 3241726 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643656347 |
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| Product | 7TM domain sensor diguanylate cyclase |
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| Protein accession | YP_002554470 |
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| Protein GI | 222112206 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTGC GCGGGGCCAC ACCGGCCTAC CACTGGTTCA AAGTGGTCCT GGAGCAGCGC
GCGGCCAGCG GCGACTGGGT GCTGGCCACC CAGACCACGT CTTTGCAGGA CGTGCGGTTC
TACGGCCCGT TCGATGCGTC GGGTACGGCG CTTGCGCCGC CAGTGCATAC GGGCCTGGCG
CAGCCCTTCG CCACGCGGCC CCTGGGCAGC GAGCGCTACC TCATGCGCCT GCAGCCCCCG
GGCCCGGGCA CCTACACGGT CTACGCCCGG CTGTACAGCG AGACGGCGCC GTCCTTCGAC
CTGTCCGTCT GGGACACGGC CGAATACCTG CAATGGCGCC AGCACAAGCG GCTGTTCGAC
GGCATCTGCT ACGGCATCCT GATCGCACTG CTGGTCTACA ACCTCACGCT CGTGGGCGTC
TTTCGGGACA CCACGTACAC CTTCCACGTC GGCCAGTGCA TCTTCGCGCT GTTGACGCTG
GCCACCTTCA ACGGCCACAC GGCCCATTAC CTGTGGGGCG ACGCGCCGTG GTGGCAGGAG
CGCAGCTATT TCGTATTGCC CAGCCTGTGG CTGTTCTTCG GCGCGCTGTT CACGCGCAGT
TTCCTGGACA CCCGGCAGAC GCCCTTGATG GACGGAGTGC TGGTGGCAAT CGGCCTGCTG
GCGGCGCTCA CCGCCGTGCT CGGCGGGCTC GGGCAATTTG CCATCGCCCA GACGCAGAAC
GAACTGCTGG CCAGCGCCGG CATCGCGGCC GCGTCGCTCG CGGCCATTCT GGTGCTGCGC
CGGGGCTTCA CGCCCGCGCG CTGGTACCTG GGCGCGCAGG CGCTGCTGTT CGTCACGGTG
GCCGGCGTGG TGCTGAGCAA CTGGAAGGTG ATCGACGCGC CCTTCATGCT CGCCAACGGC
CTGCAGATCG GCGTGGCGGC CGAGATGGTG GTGTTCGCCG TTGCGTTGAG CACCCGCATC
GACAGCCTGA ACGCCTCCCA GATCGCCCTG CGGCTGCGCG CGGACCATCT GGCCAAGGCC
GCGACCACCG ACCCTCTCAC GGGCCTGACC AACCGCATGG GGCTGACCCA GGGCGCAACG
CAACTGCTGT CGGAAGGGGG CACGCACGCC CTGCTGCTGC TCGACCTGGA CCGCTTCAAA
CCCATCAACG ACACCTATGG CCATGACGCC GGCGACGAGG TGCTGCGCGC CGTTGCCACA
CGGCTGCAGA CGCACACGCG GTCCGGCGAC ATCGTGGCCC GGCTGGGCGG CGACGAGTTC
GTGGTCATGC TGGCCCACGC GCCCGCGGGC GACGCCCTGA CGGCGCTGGT CAAGCATCTG
GAGCTGGCTA TCTGCCAGCC GGTGTACTTC CAGCACCAGG AACTGTGCGT GGGCGGCAGC
ACGGGCGTTG CGCACAGCCC GCAGGACGGC CCCACGCTGA CGGAGCTGAT GCGCTGCGCC
GACCAGCGCA TGTATCAGGC CAAGCAGGCG CACAAGGACG CGGCGCAGCA CCCGGCAGCG
CCGGCTCTGC CGTTGGCCTG A
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| Protein sequence | MPLRGATPAY HWFKVVLEQR AASGDWVLAT QTTSLQDVRF YGPFDASGTA LAPPVHTGLA
QPFATRPLGS ERYLMRLQPP GPGTYTVYAR LYSETAPSFD LSVWDTAEYL QWRQHKRLFD
GICYGILIAL LVYNLTLVGV FRDTTYTFHV GQCIFALLTL ATFNGHTAHY LWGDAPWWQE
RSYFVLPSLW LFFGALFTRS FLDTRQTPLM DGVLVAIGLL AALTAVLGGL GQFAIAQTQN
ELLASAGIAA ASLAAILVLR RGFTPARWYL GAQALLFVTV AGVVLSNWKV IDAPFMLANG
LQIGVAAEMV VFAVALSTRI DSLNASQIAL RLRADHLAKA ATTDPLTGLT NRMGLTQGAT
QLLSEGGTHA LLLLDLDRFK PINDTYGHDA GDEVLRAVAT RLQTHTRSGD IVARLGGDEF
VVMLAHAPAG DALTALVKHL ELAICQPVYF QHQELCVGGS TGVAHSPQDG PTLTELMRCA
DQRMYQAKQA HKDAAQHPAA PALPLA
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