Gene Dtpsy_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3009 
Symbol 
ID7385455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3205322 
End bp3206371 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content72% 
IMG OID643656319 
Producthypothetical protein 
Protein accessionYP_002554442 
Protein GI222112178 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGGCC CTGCCACTTC GCCTGTCCAC ACCGCGCGCC GCCGCCGCAG CGGATGGCGC 
CGGTTGCGGG GCTGGCGCTG GCTGGCCGGC GTGGCCATGG CAGCGGTGGC CGCTCTGGTG
GTGTGGCTGC TGGTGCGCCA GGGCCTGCAG GTGGACTGGC CCAGCGTATG GCAGGCGCTG
CGCGCGTTGC CTGTGCCCAC GCTGGCCGCA GCCGCGGCCC TGGCCTGGGC CGGCCACCTG
GTGTACGGGT GCTTCGACCT GTTCGGTCGC CACGTGGTAC GCCACGGGCT GGGCGCCGCC
CGGACCATGG GCGTCACGCT GATCGCCTAC CCCTTCACGC TCAACCTGGG CTCGCTGATC
GGCGGCGCTT CGGTGCGCTA CCGGTTGTAT TCGCGACAGG GCCTGGACGT GGGCCAGATC
GCGCAGGTGA TCAGCCTGTC CATCGCCACC AACTGGCTGG GCTACTGCGT GCTGGCCTGT
GCGCTGTTCT GGGCCTGGAC ACCGCCGCTG CCCGAGGGTT GGCGCATGGG CAGCGGCCAG
CTCCCTTGGT TGGGCACGGT GCTGGCCTGC GTGGCGCTGG GCTACCTGGC GCTGTGCGCG
CGGCGAGGCG GGCACCGACC GCTGATGCTG CGCGGGCGAC GCCTGCCGCT ACCGACCTGG
CGCGTGGCGC TGCTGCAGTT GGTGCTGTCG TGCACCCACT GGGCGTTAAT GGCCGCGTCC
GTGTGGGTGC TGGCGCGCCA GCAGGTGCCC TACGCCGCGG CGCTGGCCAC GGTGCTGCTG
GGCGCGGTGG CCGGGCTGGT CTCGCGCATC CCCGCCGGCC TGGGTGTGCT GGAGGCCGTG
GGTACGGCCG TGCTGGCCGT GCACCTGCCC GTGAGCCAGG CGCTGGCCGT GGTGCTGGCC
TTCCGCGCGG TGTACTACTT CGCACCGCTC GCGCCCGCGG CGCTGGCCCT GCTGGCGACC
GAGCTGTGGT GGCGGCGGCA TCAGCCGACC ACCAGTTCTC AAGCAAAATC AGCCCCTAGC
GCTTTTCAGA CAAGCGCGAG CAGCTATTAA
 
Protein sequence
MHGPATSPVH TARRRRSGWR RLRGWRWLAG VAMAAVAALV VWLLVRQGLQ VDWPSVWQAL 
RALPVPTLAA AAALAWAGHL VYGCFDLFGR HVVRHGLGAA RTMGVTLIAY PFTLNLGSLI
GGASVRYRLY SRQGLDVGQI AQVISLSIAT NWLGYCVLAC ALFWAWTPPL PEGWRMGSGQ
LPWLGTVLAC VALGYLALCA RRGGHRPLML RGRRLPLPTW RVALLQLVLS CTHWALMAAS
VWVLARQQVP YAAALATVLL GAVAGLVSRI PAGLGVLEAV GTAVLAVHLP VSQALAVVLA
FRAVYYFAPL APAALALLAT ELWWRRHQPT TSSQAKSAPS AFQTSASSY