Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2978 |
Symbol | ddl |
ID | 7385423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3170795 |
End bp | 3171793 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643656288 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_002554411 |
Protein GI | 222112147 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00577366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAAA ACGACCCCAA GATTGATGTG AAGGCGCTGG GCAAAGTGGC CGTGCTCATG GGGGGCACGT CGGCCGAGCG TGAGGTGTCG CTGATGTCGG GCGGCGGCGT GCTGCAGGCG CTGCGCTCGC GTGGCGTGGA CGCGCATGCG TTCGACCCCG CGCACAGTGA TCTGTCGGAG CTCAAGGCCC ACGGCTACAG CCGCTGCTTC ATCGCGCTGC ACGGCCGCCA TGGCGAGGAC GGTACGGTGC AGGGCGCGCT GGAGCTGCTG GGCATTCCGT ACACCGGTCC CGGCGTGATG GCGTCCAGCA TCGCCATGGA CAAGATCATG ACCAAGCGCA TCTGGCGCGC GGACGGCCTG CCCACGCCAG ACTGGCGCCT GGTGTCCAGC AGTGCGGAGA CGGCCCAGGC CTTCCAGGAG CTGGGCGCGC CGATGATCGT CAAGCCCTCG CGCGAGGGCT CCACCATCGG CCTGACCAAG GTCACTTCGC TGGGGCAGTG CGAACAGGCG TATCGGCTGG CCGCGCAGCA TGACCCCGAG GTGCTGTGCG AGCAGTTCAT CGATGGTGAC GAGACCACCT GTCCCATACT GGGCCAAGGC GCCGAGGCGC GCGCGCTGCC GGTGATCCGC ATCGAGGCGC CGCAAGGCAA CTACGACTAC CAGAACAAAT ACTTCACCGA CGTCACGCAG TACCACTGCC CGAGCGGCCT GCCCGAGGCC GAGGAGCGCG AGATCCAGCG CATCGTCGTG CAGGCTTACC GTACGCTGGG TTGCCGCGGC TGGGCGCGCG CCGACATCAT GATCCGCGCG AGCGATCGCA AGCCCTTCCT GCTGGAAATC AACACCTCGC CTGGCATGAC CGGCCACTCG CTGGTGCCGA TGTCGGCCAA TGCCAGCGGC ATCAGCTACC CCGACCTGTG CCTGCGCATC CTGGCGAGCG CGTCGCTGGA CGCGCTGCAG GGCCGGGCCG GTGCGGCAGG AGGACGGGAG CCGGTATGA
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Protein sequence | MSQNDPKIDV KALGKVAVLM GGTSAEREVS LMSGGGVLQA LRSRGVDAHA FDPAHSDLSE LKAHGYSRCF IALHGRHGED GTVQGALELL GIPYTGPGVM ASSIAMDKIM TKRIWRADGL PTPDWRLVSS SAETAQAFQE LGAPMIVKPS REGSTIGLTK VTSLGQCEQA YRLAAQHDPE VLCEQFIDGD ETTCPILGQG AEARALPVIR IEAPQGNYDY QNKYFTDVTQ YHCPSGLPEA EEREIQRIVV QAYRTLGCRG WARADIMIRA SDRKPFLLEI NTSPGMTGHS LVPMSANASG ISYPDLCLRI LASASLDALQ GRAGAAGGRE PV
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