Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2963 |
Symbol | |
ID | 7384149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 3152212 |
End bp | 3152943 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643656273 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002554396 |
Protein GI | 222112132 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.361546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCCAT CCGAGGACTT ACCGCAGGCG GCGGTTGTCA CTGCCATCCC GATCGCCGAC CGTGCGGCGG ACGCGGCCTT GGTGACGCGC GCCCTCGCCG GCGAGGCGGG AGCCTTCGCC GCCATCATGC GGCGCCACAA CCGGCTGATG TTTCGCGCCG CGCGCGGCGT GGTGCATGAC GACGCCGAGG CGCAGGACGT GGTGCAGGAG GCCTATTTGC GCGCCTTCAC GCGGCTGCGG GCCTTCCGCG GCGATGCCGC GCTGGGCACC TGGCTGGCGC GCATCTGCCT GCGCACGGCC TTGGACGTCT TGCGCCGGCG TGCGCGCAGC GTGGCCATCG ACCCCGCGCA GGCCAGCGAC CAGGAGCCGC AGCCGGAGGA TGCCATGTCC TATTTCGCCC CGCCCGACGA CGCGCCCGAC CAGGCACTTG CGCGTGCCCA GTTGCGCGCC CTGCTGGAGT CGGCCGTGCA CAGCCTGCCG CCGCTGTACC GCAGCGTGTT CCTCCTGCGT GCCGTGCAGG AGATGAACGT GCAGGAGGCG GCCTTCTGTC TGGACATCAG CGAAGAGCTG GTGCGCACCC GCTACCTGCG CTCGCGCGCC ATGTTGCGCG ACGCGCTGGG CGCGCGGGTG GAAGCCTGCG CCGACAGCGT CTTTCCGTTT GCGGGCGCGC GCTGCGACCA GGTCGTGCAG CAGGTGCTGG ACGCACTGGC GCGGCGCGGG CTGCTGGCCT GA
|
Protein sequence | MHPSEDLPQA AVVTAIPIAD RAADAALVTR ALAGEAGAFA AIMRRHNRLM FRAARGVVHD DAEAQDVVQE AYLRAFTRLR AFRGDAALGT WLARICLRTA LDVLRRRARS VAIDPAQASD QEPQPEDAMS YFAPPDDAPD QALARAQLRA LLESAVHSLP PLYRSVFLLR AVQEMNVQEA AFCLDISEEL VRTRYLRSRA MLRDALGARV EACADSVFPF AGARCDQVVQ QVLDALARRG LLA
|
| |