| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2960 |
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| Symbol | |
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| ID | 7384146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3149346 |
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| End bp | 3150899 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643656270 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002554393 |
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| Protein GI | 222112129 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00194737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCCTG ATTTCACGCC GCTGGCGATT TTGGCGATGG CGCTGCCCTT CGTCTTTGGC
ATTACCGAGG CTCCGTATTC CAACTTTTGG CCGCTGCTGG CCAGCGGCGC CTGCGCCTGG
CTGCTGGCGG CGCTGGCCTG GTGCGGCGCC TGGCGTCCCA GTGCCGCGCG CCTGGGCGCC
CATCTGGCGG CGGGTCTGCT GCTGGCGGCG CTGGTGGCCG CGGCCATCGG CCTGGTGCAG
TTCTTCATGG GCGACCCGGG GTGGGCGCCG TGGGTGCATG CCTCCAGCCC GGGCCTGGCC
TTCGGCAACT TGCGCCAGCG CAACCAGCAG GCCACGTTGC TGGCGCTGGG CGTGTGGGCG
CTGCTGTGGT GGGTGGCGCG CCTGCAGGAG CAGGTGGACG GCAACCCGGT GCTGGGAGGG
CGCGGCGCGC GCTGGCCGGT GCTGGCGGCG GTCGCGGTGC CCTGGGCCAT GGTGCTGCTG
GCCACTGCGG GCGCGGCCAC GGCCTCGCGC ACGGGGGCGC TGGAGTGGCT GGTGGTGTTG
GCGCTGCTCG TCGTGTGGCG GCGCAGCAGC GGCGCACTGG CGCTCGGCAT GGCCGGCGTG
GGGCTGGCGG TCTATGCGGT GGCCGCGTGG GGCTTGCCGC AGCTGCTGCT GCGGTGGACG
GGCATGCGCA TGGACGGCCT GTTCATGCGG ATGGCCGATG GCTCCCAGAC CTGCGTCGGC
CGCGCTACGC TGTGGTCCAA CGTGCTGGAG CTGATCGCCC AGCGGCCCTG GGCCGGCTGG
GGCTGGGGCG AGCTGGACTA CGCGCACTAC ATCCACCCGT TTGCGGGAGA GCGTTTTTGC
GTGCTGCTGG ACAACGCCCA CAACCTGCCG CTGCATCTGG CAGTGGAACT GGGCCTGCCG
GCCGCGCTGC TGCTGTGCGG CGTGCCGCTG TGGGCCGCGC TGCGCGCGCG CCCCTGGCGC
GAGACGCAGC CCCACCGCCA ACTGGCCTGG GGCGTGCTGG CCCTTGTGGG CGTGCACAGC
CTGCTGGAGT TCCCGCTGTG GTACGGGCCG TTTCAGCTGG CCACCGCGCT GGCCGTGCTG
GTGCTGCTGG CACCCTGGCT GTCGCGTGCG GCGCGCTGGC GCCCCGTGAG TGCGGTGGTG
GCGGGCGTGG CACTGCTGGC GGCGCCGGCC ATGGGGTTCG TGCTGGTACG GGACTACGCG
CGCGTGAGCG CGCTGTACCG TCCCACGGCC GAGCGGCCCG CGGCGCTGCG CGCGCTAACG
GCTGCCGACG CGGCGCGGCA GGTCTGGTTC TTCCGTGCGC CAGCGCAGTT CGCGCAACTC
ACCACTGCGG TGGTCACGCC CGCCAATGCG GCCGAGATGC ATGCCCTGGC GTTGCAACTG
CTGCACTACT CGCCCGAGCC GCGCGTGATC GAGAAGCTCA TCGCCAGCGC GCGGCTGCTG
GGCCGCGAGG ACGAGGTGGC GCTGCACACC GACCGCTACC GCCGCGCCTA TCCGTACGAA
TTCGGGCGCT GGCAGCGCGG CCAGCCTTCC GGTGGCCCGC CGCTGGAGCG CTGA
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| Protein sequence | MRPDFTPLAI LAMALPFVFG ITEAPYSNFW PLLASGACAW LLAALAWCGA WRPSAARLGA
HLAAGLLLAA LVAAAIGLVQ FFMGDPGWAP WVHASSPGLA FGNLRQRNQQ ATLLALGVWA
LLWWVARLQE QVDGNPVLGG RGARWPVLAA VAVPWAMVLL ATAGAATASR TGALEWLVVL
ALLVVWRRSS GALALGMAGV GLAVYAVAAW GLPQLLLRWT GMRMDGLFMR MADGSQTCVG
RATLWSNVLE LIAQRPWAGW GWGELDYAHY IHPFAGERFC VLLDNAHNLP LHLAVELGLP
AALLLCGVPL WAALRARPWR ETQPHRQLAW GVLALVGVHS LLEFPLWYGP FQLATALAVL
VLLAPWLSRA ARWRPVSAVV AGVALLAAPA MGFVLVRDYA RVSALYRPTA ERPAALRALT
AADAARQVWF FRAPAQFAQL TTAVVTPANA AEMHALALQL LHYSPEPRVI EKLIASARLL
GREDEVALHT DRYRRAYPYE FGRWQRGQPS GGPPLER
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