| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2762 |
|---|
| Symbol | |
|---|
| ID | 7385529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2939708 |
|---|
| End bp | 2941462 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643656070 |
|---|
| Product | methyl-accepting chemotaxis sensory transducer |
|---|
| Protein accession | YP_002554196 |
|---|
| Protein GI | 222111932 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.636912 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCA ACCATTTGCC CGTCGCCCGC AAACTGTGGG GACTCGTCCT GGGGCTGCTG
GTCTCCATGC TGCTTTTGCT GGCGGGCCTG TTGGCCTACT CCGCCCAGCT CGATGATGAG
GCGGCGCGCA TCGTGCAGGC CAACGAAGAC CGCATCAGCC TGGCCCTGCG CTGGAAAGGG
CTGACCACGC TGGCCGTGGA CCAGTCCGTG AGCGCGCTGG CCTCGGCCGA CGAGACCCTG
GCGTCGGGCC TGCAGAAGAA AGCCAAGCAG GGGATCGAGG CCATCAACGC CCTGCAAAAA
CAGGTGGAGG CTGTGGCCTT CTCTGCGGAG GACAAGGCCC AGATGGAACG CGTGGCCGCC
GCCCGCAAGG TGGTGCTGGA CGCGCTGGCG GAAGCCACCA AGGCCCGGGC CGAAGGCGAC
TTCGCCCGCA CGCTGACCCT GGTGGACAGC AAACTGCTGC CCGCCGTGGA GCGCTACGTG
GGCGAACAGG ACTCCTTCGT CCAACTGCAA GAACGCCAGC GCGACGCCGC CAAGCAAGAG
GCCCAGGCCT TGCGCCAGCG CGCCATGTGG ATGGGCGCGG GCATCGCCGC GGTGGTGGTG
GTCTTGGGCC TGGTGCTGGC GAATCTGCTC GTGGGCTCCA TCACGCATCC CCTGGAGCGG
GCCGTGGGGC TGGCTGACGC GATTGCCGGT GGCGACTTGA CGCAAGACGT GCACGATGAC
CGTCGTGACG AACTGGGCCA CCTGCTGCGT TCGCTGTCGG CCATGGGAGC ACGTCTGCGC
GGCGTGGTGG GCGAAGTGCG CTCGGGCGTG GAATCGGTCT CGGCCGCGTC CAGCCAGATC
GCCACGGGCA ACCACGACCT GTCTGCGCGA ACCGAGCAGA CCGCGGCCAA CCTCGAAGAG
ACGGCCGCCA GCATGGAAGA GCTCACCGCC ACCGTCACCC AGTCGGCGGA CACCGCGCGC
CAGGCCAACC AACTCGCCGC CAACGCCGCG CAAGCCGCAG AGCGTGGCGG CGAAGTGGTG
GGCCAGGTGG TCACCAGCAT GCAGCAGATC ACCGAATCCA GCCGCAAGAT CGCCGACATC
ATCGGCGTGA TCGATGGCAT TGCCTTCCAG ACCAACATCC TGGCGCTGAA CGCCGCCGTG
GAAGCCGCAC GCGCGGGCGA GCAGGGCCGC GGCTTTGCCG TGGTGGCGGG TGAAGTGCGC
AGCCTGGCGC AGCGCAGCGC CGAGGCCGCC AAGGAGATCA AGCAGCTCAT CACCACCAGC
GTGGACAACG TGCAATCGGG CTCGGCCCAG GTGGAGCAGG CCGGCCAGAG CATGCAGGAC
ATCGTGCACA GCGTGCGCCG CGTGAGCGAC CTGATCGGCG AGATCACCGC TTCGTCCACC
GAGCAGCGCG ACGGCATCGG CCAGGTGAAC CAGGCCGTGG CGAACCTGGA CCAGATGACG
CAGCAAAATG CCGCGCTGGT GGAAGAGTCC AGCGCCGCCG CCGCCGCCAT GCATGAACAG
GCGCAGCGCC TGGCGCAGGT AGTGGCCGTG TTCAACGTGG GCAATGGCGC CGTCGCGGCG
CCCCGCAGCC CGGCCCGCGT GGCGCCGCCA GCGGTAGCGC CCGCCCCGGT CAAGACACCG
GCCGCAACGC CGGCGCGCGC GACGCTGGCC AAGCCCATGC CGACAAAGGC TGCCGCCAAG
GTGTCCGCCC CCCAGATCGC GCCGGCCAAG ACGCCTGCGG CATCGGATGG GGATGGCGAA
TGGGAGAGCT TCTAA
|
|---|
| Protein sequence | MNFNHLPVAR KLWGLVLGLL VSMLLLLAGL LAYSAQLDDE AARIVQANED RISLALRWKG
LTTLAVDQSV SALASADETL ASGLQKKAKQ GIEAINALQK QVEAVAFSAE DKAQMERVAA
ARKVVLDALA EATKARAEGD FARTLTLVDS KLLPAVERYV GEQDSFVQLQ ERQRDAAKQE
AQALRQRAMW MGAGIAAVVV VLGLVLANLL VGSITHPLER AVGLADAIAG GDLTQDVHDD
RRDELGHLLR SLSAMGARLR GVVGEVRSGV ESVSAASSQI ATGNHDLSAR TEQTAANLEE
TAASMEELTA TVTQSADTAR QANQLAANAA QAAERGGEVV GQVVTSMQQI TESSRKIADI
IGVIDGIAFQ TNILALNAAV EAARAGEQGR GFAVVAGEVR SLAQRSAEAA KEIKQLITTS
VDNVQSGSAQ VEQAGQSMQD IVHSVRRVSD LIGEITASST EQRDGIGQVN QAVANLDQMT
QQNAALVEES SAAAAAMHEQ AQRLAQVVAV FNVGNGAVAA PRSPARVAPP AVAPAPVKTP
AATPARATLA KPMPTKAAAK VSAPQIAPAK TPAASDGDGE WESF
|
|---|
| |