Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2608 |
Symbol | livM |
ID | 7384277 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2771659 |
End bp | 2772900 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643655916 |
Product | leucine/isoleucine/valine transporter permease subunit |
Protein accession | YP_002554043 |
Protein GI | 222111779 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0589092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACGCCA CCGGTTTTTC TTCCCATCTC AAGAACGCGC TGATCGCCAC CTTTCTGGCG GCCATCGTGG TACTGCCCAT CTTCACGCTG CACCTGGAGC GCGCGGGCAC GCGCACCATC ATCGTGCCCG AATGGCGCAC GCTGCTGTGG GGGTGCCTCG CCGTGTTCGT GGTGCAGCTG CTGCGCCCGC TGCTGGGTGC GCGGCTGCCC AAGCTGTCGC TGCCCAGCCT GCCTCAGGCG GCGCCGGGCC AGCGCAAGGT GCTGATCTTC GTGGCGCTGA TGATCGCGGC ATCGTGGCCG TTCTTCGCCG GCCGCAACGC GGTGGACATC GCCACGCTGG CCATGATCTA CGTGATGCTG GGCCTCGGCC TGAACATCGT GGTGGGCTTC GCCGGCCTGT TGGACCTGGG CTTCGTGGGC TTCTATGCCG TGGGTGCCTA CACCTATGCG CTGCTATTCC ACTGGGCCGG CTGGAGCTTC TGGGAAGCCC TTCCCCTGGC CGGCGCGGCG GCGGCGCTGT TCGGCTTCGT GCTGGGCTTT CCAGTGCTGC GCCTGCGGGG TGACTATCTG GCCATCGTGA CGCTGGGCTT TGGCGAAATC ATCCGGCTGC TGCTGGTCAA CCTGACCGAC TGGACGGGCG GACCAGACGG CATCTCCAGC ATCCCCAAGC CGTCCGTGCT GGGCCTGGAG ATGACGCGCT CGCCCACCGT CGAGGGCGGC ACCACCTTCC ACCAGTTCTT CGGGATGGAG TTCAACTCCC TGCACATGGT GATCGCCTTG TACCTGATGG CGCTGCTGCT CGCGGTGGTC ACGCTGTTCA TCAGCAACCG CCTGATCCGC ATGCCCATCG GCCGCGCCTG GGAGGCACTG CGCGAGGACG AGATCGCCTG CCGGTCGCTG GGCCTGAACC CCATGAAGAT CAAGCTCTCG GCCTTCACGC TGGGCGCCAT GTTCGCGGGC TTCGGCGGCG CGTTCTTCGC GGCGCGCCAG GGCATCGTGA ACCCCGAGTC GTTCACCTTC ATCGAGTCTG CGCTGATCCT GGCCATCGTG GTGCTGGGCG GCATGGGCTC GCAGCTGGGC GTGATCGTGG CGGCCATCAT CCTTACCGTG TTGCCCGAAC TGGCACGCGA ATTCTCCGAG TACCGCATGC TGATCTTCGG CCTGGTCATG ATCCTGATGA TGGTGTGGCG CCCGCAGGGC CTGCTGCCCA TGAAACGCCA CCATGTGGAG GTGCCCGCAT GA
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Protein sequence | MHATGFSSHL KNALIATFLA AIVVLPIFTL HLERAGTRTI IVPEWRTLLW GCLAVFVVQL LRPLLGARLP KLSLPSLPQA APGQRKVLIF VALMIAASWP FFAGRNAVDI ATLAMIYVML GLGLNIVVGF AGLLDLGFVG FYAVGAYTYA LLFHWAGWSF WEALPLAGAA AALFGFVLGF PVLRLRGDYL AIVTLGFGEI IRLLLVNLTD WTGGPDGISS IPKPSVLGLE MTRSPTVEGG TTFHQFFGME FNSLHMVIAL YLMALLLAVV TLFISNRLIR MPIGRAWEAL REDEIACRSL GLNPMKIKLS AFTLGAMFAG FGGAFFAARQ GIVNPESFTF IESALILAIV VLGGMGSQLG VIVAAIILTV LPELAREFSE YRMLIFGLVM ILMMVWRPQG LLPMKRHHVE VPA
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