| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2508 |
|---|
| Symbol | |
|---|
| ID | 7384779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2670583 |
|---|
| End bp | 2671218 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655817 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002553944 |
|---|
| Protein GI | 222111680 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1279] Lysine efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACTC AACACGCCGC CGCTTCCTCC TGGCTCACGG GCTTCACCGT GTGCCTGTCG
CTCATCGTCT CCATCGGAGC GCAGAACCTG TACGTGCTGC GCCAGGCCGT GCAGGGTCAA
CACGTGCGCG CCTGCGTGGC GTGGTGCGTG GCCAGCGACG CGCTGCTGGT GGCGCTGGGC
GTGGCGGGCA TGGCGCAGGT GCTGGGCCGT TCGCCCACGC TGGCGCATGC GCTGCAACTG
GGCGGTGCGC TGTTCCTGCT GGCCTACGGC TTGTTTGCCT GGCATCGCGC TTTCTTTGCA
CCGGATGCGG GGCTGAACGC CTCGGGTGGC GAACGCGTGG CGCGCGGGGT GCTGGGTGTG
CTCAGCGGCC TGGCCGTCAT CACGCTGCTC AACCCGCATG TGTACCTGGA CACGGTGGTG
CTGATCGGCT CCATCGGTGC GCGCCAGGAT GGTTGGCTCA AGTGGGTGTT CGTGCTGGGG
GCGGCGTCGG CCAGTCTGAC CTGGTTCGTG GTGCTGGCTT TCGCCGGGCG GCGCCTGCAG
GGCGTGTTTG CCAACCCGCG CGCCTGGCGC GTGCTGGACA CGCTGACGGG CGCGATGATG
TTCGTGCTGG CCTGGTGGGT GTGGCAGGGT GCCTGA
|
|---|
| Protein sequence | MFTQHAAASS WLTGFTVCLS LIVSIGAQNL YVLRQAVQGQ HVRACVAWCV ASDALLVALG
VAGMAQVLGR SPTLAHALQL GGALFLLAYG LFAWHRAFFA PDAGLNASGG ERVARGVLGV
LSGLAVITLL NPHVYLDTVV LIGSIGARQD GWLKWVFVLG AASASLTWFV VLAFAGRRLQ
GVFANPRAWR VLDTLTGAMM FVLAWWVWQG A
|
|---|
| |