Gene Dtpsy_2502 details

Gene Information

• Locus tag: Dtpsy_2502
• ID: 7384773
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 2663103
• End bp: 2663606
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643655811
• Product: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_002553938
• Protein GI: 222111674
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.978332
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGGCGG CGGACGCAAT GGGCATGAAT TTCAGAATCG GCGAAGGGTG GGACGTGCAT 
GCGCTGGTGC CCGGGCGGCG CCTGGTCATC GGCGGGGTGG AGATCCCGCA CACCATGGGC 
TTGCTGGGCC ATTCCGATGC CGATGTGCTG CTGCATGCCA TCACCGATGC GCTGCTGGGT 
GCTGCGGCGC TGGGCGACAT CGGCAGCCAC TTCCCCGACA CCGACGCGCG CTTCAAGGGC 
GCGGACTCGG TGGCGCTGCT AGAGGAGGCG GCGCGCCGCG TGGGCGACAA GGGCTACGCC 
ATCGGCAACA TCGACAGCAC CGTGGTCGCG CAGGCGCCGC GGCTGGCGGC GCACATCCCC 
GCCATGCGCG AGCGCATCGC CGCCGCGCTG GGCCTGGTGC TGGACCAAGT GAACGTGAAG 
GCCAAGACCG CCGAGCGCCT GGGCCCCGTG GGGCAGGGTC TGTCCATCGA GGCGCGCGCC 
GCCGTGTTGC TATTCAAAAA ATAG 

 

Protein sequence

MRAADAMGMN FRIGEGWDVH ALVPGRRLVI GGVEIPHTMG LLGHSDADVL LHAITDALLG 
AAALGDIGSH FPDTDARFKG ADSVALLEEA ARRVGDKGYA IGNIDSTVVA QAPRLAAHIP 
AMRERIAAAL GLVLDQVNVK AKTAERLGPV GQGLSIEARA AVLLFKK