Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2465 |
Symbol | |
ID | 7383967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2620820 |
End bp | 2622016 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643655773 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002553901 |
Protein GI | 222111637 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.357174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCGA AGCTCACGAC ATTGGCGTTC GTGCTCGGGG CCGCAGGGCT CATGGCGTCG ACCGCGCACG CGCAGGACAA GGTCAAGATC GGCTTCATCA CCGACATGTC CAGCCTCTAC GCCGACGTGG AAGGCAAGAA CGGTGGCGTG GCCATCCAGA TGGCCATCGA CGACTTCGGC GGCAAGGTGC TGGGCAAGCC CATCGAGCTG CTGACGGCCG ACCACCAGAA CAAGGCTGAC ATCGCTGCCA GCAAGGCGCG CGAGTGGATC GACACGCAGG GCCTGACCAT GATCTTCAGC GGCACCAACT CCGGCACTGC GCTGGCGCTG GCCAAGATCG CCGAAGAGAA AAAGCGCGTG ATGATCAACA ATGGCGCGGC GTCCTCTGCG CTGACCAACG ACCAGTGCAC GCCCTATACC GTGCACTACG CCTACGACAC CGTGGCCTTG GCCAAGGGCA CGGGCGGTGC CATCGTCGAT GGCGGCGGCA AGAGCTGGTT CTTTCTGACG GCGGACTATG CCTTCGGCCA TGCGCTGGAA GCCGACACCT CCAAGGTCGT GAAGGACAAG GGCGGCACGG TGGTGGGCGC GGTGCGCCAC CCGCTGAATG CGTCCGACTT CTCGTCCTTC CTGCTGCAGG CGCAGAACTC CAAGGCGCAG ATCCTGGGCC TGGCCAATGC CGGCGGCGAC ACCATCAACT CGATCAAGGC GGCCAAGGAA TTCGGCATCG GCAACAGCAT GAAGCTGGCC GGCCTGCTGA TCTTCTTCAG CGACGTGCAC AGCCTGGGCC TGCGCAACAC CGAAGGCCTG CAGTTCACCA CCAGCTGGTA CTGGGACCTG AACGAAGAGA CGCGCAAGTT CGCCGACAAG TTCATGGCCA AGACCAAGCG CCGCCCCACC GAGATCCAGG CTGCCGACTA CTCGGCCACG ATGAACTACC TGAAGGCCGT CGAGGCCGCC AAGACCACCG ACGCCGACAA GGTGATGGAG GCCTGGCGCG CCATGAAGAT GAACGACTTC TTCGGTTCCG GCTACCTGCG TGCCGACGGC CGCTACGTGC ACGACATGTA CCTCATGCAG GTGAAGTCGC CGTCCGAGTC CAAGGGCACC TGGGACTACT ACAAGCTCAT CAAGAAACTG CCGGGTGAAC AGGTGTTCAC CACCAAGGCC GAGAGCAAGT GCGCCCTCTG GAAGTGA
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Protein sequence | MKAKLTTLAF VLGAAGLMAS TAHAQDKVKI GFITDMSSLY ADVEGKNGGV AIQMAIDDFG GKVLGKPIEL LTADHQNKAD IAASKAREWI DTQGLTMIFS GTNSGTALAL AKIAEEKKRV MINNGAASSA LTNDQCTPYT VHYAYDTVAL AKGTGGAIVD GGGKSWFFLT ADYAFGHALE ADTSKVVKDK GGTVVGAVRH PLNASDFSSF LLQAQNSKAQ ILGLANAGGD TINSIKAAKE FGIGNSMKLA GLLIFFSDVH SLGLRNTEGL QFTTSWYWDL NEETRKFADK FMAKTKRRPT EIQAADYSAT MNYLKAVEAA KTTDADKVME AWRAMKMNDF FGSGYLRADG RYVHDMYLMQ VKSPSESKGT WDYYKLIKKL PGEQVFTTKA ESKCALWK
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