| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2450 |
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| Symbol | |
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| ID | 7383952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 2602292 |
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| End bp | 2604394 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643655758 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002553886 |
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| Protein GI | 222111622 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGC CCGAGCATGT TGCCGCGTGG GAAGACGTGG CGCCCGAGCG GGAGCCTGAA
GGCTTCGCAT GGCTGCCCGG TCCGCTGGTG GGCAAGCTGC TGGCGGTGGC GGCGCTGGCC
ATCGTGCTCT CCGCAATGCT CACCGTGTGG GTGCTGTCGC GCGCCGCGGG TCAGGAGGTC
ATGCAGCGCC TGGTCAGCCA GCAGAACGAC GAGGTGGAAC TGGTGGCGCG GTTGCTGGCC
AGCAAGATCG AGCAGAGCCA GAAGGTGCTT GCCACCGTGG CCGAGGGCAT CACCCCCGAG
CTGTTGGAGT CCCCCGCGTC GCTGGAATGG CTGCTGCAGC AGGGCCTGCC GGCCGTGCGC
TTCTTCGACG CCATCCAGGT TGCGCGCAAG GACGGCAACC TCGCCATCAA CCTGCGCTAT
GGCAAGCTGG AAAAGGCCTC GGGTCTGGAC CCGGGCGAGC GCGATTACCT CGTGCGCACG
CTGCTGGACG GCAAGCCGCT GGTGTCGGGC CTCATTGGCG CCACGCCGGC CGAGGCGCGC
GTGATGTTCA CCATGCCGCT GCTGCGGGGG GAGGGGCGCG TCATCGGGGC CGTGGCGGGC
GTGCTGCGGC TGCAATCGCA GGGACTGCTG CCACATTCCC TGGCGCTGCC CGCACGCAGC
GATTCGCAGC TGGTGGTGTT CACGCGCGAT GGGGTGATCC TGGCGCACCC CAATATGGAG
CGCGTGCTGG GCCAGGTGGC CGACGAGCCC GGCCTGGGCG AGGCCTATGC GCGCTGGCGC
CGCGCGGACG ATGCGCCGCT GGCCGGGCGC GCGCAAACCA CCGTGCAGGC GGACCACGTG
GTGAGCTTGG CCAGCGTGCC CATGCCGCAA TGGGTGGTGG CCCGGGTGAG CGCTTCGCAG
GCCGTGCTGG CGCCAATGCA GGGTGTCCAG CGCCGGGCCT GGGCGCTCGC GGCCGCGGCC
ACGGCGCTGG TGGCCCTGCT GGCGCTGGGC GCCATGCTGT GGATCGCGCG CCCGCTGATC
CTGCTGCGCC AGCGTGCCCG AGCGCTGATG GACGCGGAGG CCGCTGGTGC GCCGGCGAGC
GGGTCCGCCG GGTATGACGG CCCATGGCCG CACAGCCCTG GCGAGGTGGA CGATGTGGTG
CGCGTCTGCA CCCGGCTGCT GGAACACCGG CGGCTGCAAC AGCGCGGGTC GGAAGCGTCG
GCGCGCCAGT TGCGTGCGGT GCTGGCGCAC GTGCCGCTGG GCATCGTCGT CAGCCGCGAC
GAGCAGGTGG AGGTCGTGAG CCAGCAGGCC GGCCGCATGC TGGGCTATGC GCCGGCGCAG
CTCCAGGGGC GCCGGCTGAC GGATCTGCTG GCTTCGCCGC CCGGCGCAGT GGATGTGGCC
CAGCAGGTGC GTGCGCGGTT TGCGGCCCAC GGCAGCTTCG ATGGCGAACT GCCGCTGCTG
CGCAAGGACA GCAGCACGCT GTGGGTGCGG GCGCAGGGGC AACTGGTGGA GCCCGGCGTG
CCGGCTAGCG GCCTGGTGTG GTCGCTGGAA GACTTCACTG CGGAGCGTGC AGCGCGCCAG
CAGCAGTCCT GGGAGCGCGC CCACGACCCC TTGACCCAAC TGCTCAACCG CGCGGAGTTT
GAGTTGCGCC TGCAGATGCT GCTGGACGCG CGTGCTGCGC GGGGCCCGCG GGGTGTGCCG
GAGGAAGACG GCGGGGTGCT GCTGTTCATG GACCTGGACC ATTTCACCGT GGTCAACGAC
GTTGCCGGCC ATGATGCGGG CGATGACGTA CTGCGCCATC TGGCACGTCT GCTCGAATCG
GAAGTGCGGC ACAACGGCTG GGCTGCGCGC GTGGGCGGCG ACGAGTTCGC CATCGTGCTG
CCGGGCAGCT CCTTGGCGCG CGGGCAGGCC GTGGCCGAGC AGTTGCGCGC CGCCGTGCAG
GCGTGGGAGC CCGCATATGG CGGGCGCAGC TTCACCCTGG GCCTGAGCGT GGGGCTGGTC
CCGCTGGCGC CCGGTGCGCA CGGTGTGGCG GCGCTGCTCT ATGCCGCCGA CATGGCCTGC
TACCAGGCCA AGCGCGCCGG GCGCAACCGC ATCGCCGTAG GCAGCGTGCA GGTACCGGCC
TGA
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| Protein sequence | MTPPEHVAAW EDVAPEREPE GFAWLPGPLV GKLLAVAALA IVLSAMLTVW VLSRAAGQEV
MQRLVSQQND EVELVARLLA SKIEQSQKVL ATVAEGITPE LLESPASLEW LLQQGLPAVR
FFDAIQVARK DGNLAINLRY GKLEKASGLD PGERDYLVRT LLDGKPLVSG LIGATPAEAR
VMFTMPLLRG EGRVIGAVAG VLRLQSQGLL PHSLALPARS DSQLVVFTRD GVILAHPNME
RVLGQVADEP GLGEAYARWR RADDAPLAGR AQTTVQADHV VSLASVPMPQ WVVARVSASQ
AVLAPMQGVQ RRAWALAAAA TALVALLALG AMLWIARPLI LLRQRARALM DAEAAGAPAS
GSAGYDGPWP HSPGEVDDVV RVCTRLLEHR RLQQRGSEAS ARQLRAVLAH VPLGIVVSRD
EQVEVVSQQA GRMLGYAPAQ LQGRRLTDLL ASPPGAVDVA QQVRARFAAH GSFDGELPLL
RKDSSTLWVR AQGQLVEPGV PASGLVWSLE DFTAERAARQ QQSWERAHDP LTQLLNRAEF
ELRLQMLLDA RAARGPRGVP EEDGGVLLFM DLDHFTVVND VAGHDAGDDV LRHLARLLES
EVRHNGWAAR VGGDEFAIVL PGSSLARGQA VAEQLRAAVQ AWEPAYGGRS FTLGLSVGLV
PLAPGAHGVA ALLYAADMAC YQAKRAGRNR IAVGSVQVPA
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