| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2409 |
|---|
| Symbol | |
|---|
| ID | 7383911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 2560211 |
|---|
| End bp | 2561179 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643655718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002553846 |
|---|
| Protein GI | 222111582 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.417331 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGTC GCAGCGCACT CACCCTGGGC CTGCTGGCCC TGCTCGGCAC GGCCGCCCAG
GCCCAGTCCG GCTACCCCAA CAAGCCCATC CGCCTGCTGG TGCCCTTCGC CGCGGGCGGC
ACCACCGACC TGATCGCCCG CGTGGTGGCC GAGCCCCTGG GCCGCGAGCT GGGCCAGCCC
GTGGTGGTGG AGAACAAGGG CGGCGGCGGC GGCGCCATCG GTGCGGCCGA AACCGCGCGT
GCCACGCCGG ACGGCTACAA CCTGGGCGTG GCCACCGTGT CCACCACGGC CACCAACCCG
GCCATCAACC CCAAGATCCC CTACAACGTG TTCACCGACT TCACCCCGGT CGTGAACATC
GCCGCCACGC CCAACGTGAT TGCGGCCAAC CCGCAGTTCG TCGGCAAGGA ATACAAGAGC
TTCCTGGCCG AAGTCAAGAA GACTCCAGGC AAGTACTCGT TCGGCTCGCC CGGCACCGGC
AGCATCGGCC ACCTGATGAT GGAAATGTTC ATGCTGGAGA CCGGCACCCA GCTGGTGCAC
GTGCCCTACC GCGGCTCGGG CCCGGCACTG AACGACGCCG TCGCCGGCCA GATCCCGCTG
ATCTTTGACA ACCTGCCGTC CGCCCTGCCC TTCATCAAGG ACAAGCGCCT GACCGCCCTG
GTGGTGGCCG CCCCGCAGCG CCTGGCCGTG CTGCCCGACG TGCCCACACT GGCCGAAGTG
GGCCTGCCCA ACGTGAACCG TATGGCCTAT TACGGCATCA TCGGACCCAA GGGCCTGCCC
AAGGACATCG TGGACAAGGT CAACGCCGCC GTGCACAAGG TGCTGAAGGA CCCTGCGGTG
CGCAAGCGCA TCGAGGACAC GGGCTCGCTG ATCGTGGCCG ACACGCCGGC GAAGTTCGCC
CAGGAAATCA AGGCCGAATA CACGGCTTAC AAAAACGTGG TGGACAAGCA GAAGCTCACC
ATGGACTGA
|
|---|
| Protein sequence | MIRRSALTLG LLALLGTAAQ AQSGYPNKPI RLLVPFAAGG TTDLIARVVA EPLGRELGQP
VVVENKGGGG GAIGAAETAR ATPDGYNLGV ATVSTTATNP AINPKIPYNV FTDFTPVVNI
AATPNVIAAN PQFVGKEYKS FLAEVKKTPG KYSFGSPGTG SIGHLMMEMF MLETGTQLVH
VPYRGSGPAL NDAVAGQIPL IFDNLPSALP FIKDKRLTAL VVAAPQRLAV LPDVPTLAEV
GLPNVNRMAY YGIIGPKGLP KDIVDKVNAA VHKVLKDPAV RKRIEDTGSL IVADTPAKFA
QEIKAEYTAY KNVVDKQKLT MD
|
|---|
| |