Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2285 |
Symbol | |
ID | 7384878 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2428479 |
End bp | 2430284 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643655594 |
Product | succinate dehydrogenase, flavoprotein subunit |
Protein accession | YP_002553723 |
Protein GI | 222111459 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTACA CCAAAGCCAA CATCACCAAG CGCAAGTTCG ACGTGGTCAT CGTCGGTGCC GGCGGCTCGG GCATGCGCGC CTCGCTGGAA CTGTCCCGCG CAGGCCTGAA CGTGGCCTGC CTGTCCAAGG TCTTCCCCAC CCGCTCGCAC ACCGTGGCAG CGCAAGGCGG CGTGTCCGCA TCGCTGGGCA ACATGAGCGA AGACAACTGG CACTACCATT TCTACGACAC CATCAAGGGC GGCGACTGGC TGTCCGACCA GGACGCCGTC GAGTTCATGT GCCGCGAAGC ACCCAAGGTG GTGATTGAGC TCGAACACTT CGGCATGCCG TTCGACCGCA ACCCCGACGG CACCATCTAC CAGCGCCCCT TCGGCGGCCA CACGGCCAAC TACGGTGAGA AGCCCGTGCA GCGCGCCTGC GCCGCGGCCG ACCGTACCGG CCACGCCATG CTGCACACGC TGTACCAGAA GAACGTCGAA TCCAAGACCA ACTTCTTCGT GGAATGGATG GCGCTGGACC TGATCCGCGA CGCTGAGGGC GACGTGGTCG GCGTAACCGC GCTGGAACTG GAAACCGGCG ACCTGTACGA ACTGCACGCC AAGGCCGTGC TGCTGGCCAC AGGCGGCGCT GGCCGCATCT TTGCGGCATC GACCAACGCC TTCATCAACA CCGGTGACGG CCTGGGCATG GCCGCACGCG CGGGCATCCC GCTGCAGGAC CTGGAGTTCT GGCAGTTCCA CCCCACCGGC GTGGCCGGCG CGGGCGTGCT GCTGACCGAA GGCTGCCGCG GCGAAGGTGC CATCCTGCTG AACAGCAATG GTGAGCGTTT CATGGAGCGT TACGCGCCCA CCTTGAAGGA CCTGGCACCG CGCGACTTCG TGTCCCGCTC GATGGACCAG GAGATCAAGG AAGGCCGTGG CTGCGGTCCC AACAAGGACT ACATCCTGAT GAAGCTCGAC CACCTGGGCG CTGACACCAT CCGCAAGCGC CTGCCGTCGG TGGAAGAGAT CGGCCACAAC TTCGCCAACG TGGACATCAC CAAGGAACCG ATCCCCGTCG TGCCCACCAT CCACTACCAG ATGGGCGGCA TTCCGACCAA TATCCACGGC CAGGTGGTCA CCTGGGACGG CGAGAAGAAC AACGTGGTCA ATGGCCTGTA CGCCGTCGGC GAATGCGCCG CGGTGTCGGT ACACGGCGCC AACCGCCTGG GCACGAACTC GCTGCTCGAC CTGCTGGTGT TCGGCAAGTC GGCCGGCAAG CACATCGTGC AATTCGTTGG GGGCTACGGC GAGCACAAGG CCGTGCCGGC CGATGGCAGC GACCGCACCC TGGCGCGCCT GAACCAGTTG GAAGAATCCA AGGACGGCGT CTACGCCCAG GACCTGGCCA ACGACATCCG CCAGACCATG CAGCAGCACG CCGGCGTGTT CCGCACGCAA AAGGGCATGG ACGAAGGCGT GGTCAAGATC AACGCCATCC GCGAGCGCGT GGGCACCGTG ACCCTGAAGG ACAAGTCCAA GGTCTGGAAC ACCGCACGCA TGGAAGCGCT GGAAGTGGAC AACCTGATCG AGGTCGCCCA GGCCACGATG ACCTCGGCCG CGGCCCGCCA GGAGTGCCGT GGCGCACACA CCGTGGACGA CTACGAGCAC CCTGCCGACC ATCCCGACTT CCCGTTGGGC CGCAATGACA AGGAGTGGCT CAAGCACACG CTGTGGCACA GCGCCAGCAA CAGCCTGAGC TACAAGCCCG TGAACATGAA GCCCCTGACG GTGGACAGCA TTCCTCCGAA GGTCCGCACG TTCTAA
|
Protein sequence | MSYTKANITK RKFDVVIVGA GGSGMRASLE LSRAGLNVAC LSKVFPTRSH TVAAQGGVSA SLGNMSEDNW HYHFYDTIKG GDWLSDQDAV EFMCREAPKV VIELEHFGMP FDRNPDGTIY QRPFGGHTAN YGEKPVQRAC AAADRTGHAM LHTLYQKNVE SKTNFFVEWM ALDLIRDAEG DVVGVTALEL ETGDLYELHA KAVLLATGGA GRIFAASTNA FINTGDGLGM AARAGIPLQD LEFWQFHPTG VAGAGVLLTE GCRGEGAILL NSNGERFMER YAPTLKDLAP RDFVSRSMDQ EIKEGRGCGP NKDYILMKLD HLGADTIRKR LPSVEEIGHN FANVDITKEP IPVVPTIHYQ MGGIPTNIHG QVVTWDGEKN NVVNGLYAVG ECAAVSVHGA NRLGTNSLLD LLVFGKSAGK HIVQFVGGYG EHKAVPADGS DRTLARLNQL EESKDGVYAQ DLANDIRQTM QQHAGVFRTQ KGMDEGVVKI NAIRERVGTV TLKDKSKVWN TARMEALEVD NLIEVAQATM TSAAARQECR GAHTVDDYEH PADHPDFPLG RNDKEWLKHT LWHSASNSLS YKPVNMKPLT VDSIPPKVRT F
|
| |