Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2241 |
Symbol | |
ID | 7384552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 2383067 |
End bp | 2383711 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643655549 |
Product | hypothetical protein |
Protein accession | YP_002553679 |
Protein GI | 222111415 |
COG category | [R] General function prediction only |
COG ID | [COG3577] Predicted aspartyl protease |
TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.103232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCGCC TGACCCTGCG CCTGGCCGTC GCCCTGCTGG CGGTCACCGG CCTGCCCGCC GCCTACGCGC AAAGCGTGGC GCTGGCCGGC ATCCTGGGCG GCAAGGCCCT GCTGGTGGTG GACGGCAGCG CGCCGCGCAG CGTGGCACCG GGCGGCTCCC ACATGGGCGT GCACGTGGTG TCGGTGGGCC GCGACGGCGT GGTGCTGGAG GTCGCGGGCG CGCAGCGCGC GATTCAGCTG GGCGAGTCGC CCGTGAGCAT TGGCGGCAGC GCGGCCGGCC AGCGTATCGT GCTCAAGGCC GACGCGCGCG GGCATTTCAT CAACAGCGGC TTCATCAACG GTCGCGTGAT GCAGTACATG GTGGACACGG GCGCCACCAC CGTGGCCATC GGCCGGCCCG ACGCGCAGCG CATGGGCCTG AAGTTCGAAC AGGGCCAGCC CGTGATGATG AACACCGCCA ACGGCACGGC GCAGGGCTGG CGCATGCGGC TGGAGTCCGT GCGGGTGGGC GATGTGGAAC TGCGCAGCGT GGACGCCATC GTCACCGCGG AGGCCATGCC CTATGTGCTG CTGGGCAACA GCTTCCTGCG CGAATTCCAC ATGAACCGCA GCGGCGACGA GATGGTGCTG CAACGCCGCC GCTGA
|
Protein sequence | MHRLTLRLAV ALLAVTGLPA AYAQSVALAG ILGGKALLVV DGSAPRSVAP GGSHMGVHVV SVGRDGVVLE VAGAQRAIQL GESPVSIGGS AAGQRIVLKA DARGHFINSG FINGRVMQYM VDTGATTVAI GRPDAQRMGL KFEQGQPVMM NTANGTAQGW RMRLESVRVG DVELRSVDAI VTAEAMPYVL LGNSFLREFH MNRSGDEMVL QRRR
|
| |