Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2025 |
Symbol | |
ID | 7385017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2166568 |
End bp | 2167803 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643655343 |
Product | Extracellular ligand-binding receptor |
Protein accession | YP_002553481 |
Protein GI | 222111217 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.718345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTCG CTATCAAAAT GGTAGCTGCT AGCGCAATCT TTGCATGTGC TGGCGGCGCA TTCGCCCAAA AAGGGGAAAC CGTCAAGATC GCCTGGCTCG ATCCGCTGTC GGGCCTCATG GCCGCAGTGG GCACCAACCA GCTCAAGAGC TTCCAGTTCA TCTCCGAGGA GTTCAACAAG AAGAACGCGT CGGGCGTGAA GTTCGAGATC ATCGGCATCG ACAACAAGCT CAGCCCGCAG GAGACCACCA GCGCACTGCG CTCCGCCATG GACCAGGGTG CGCGCTACGT GGTGCAGGGC AATGGTTCGG GCCCGGCGCT GGCCATCATC GACGCACTGG AAAAGCACAA CGCGCGCAAC CCGGGCAAGG AAGTCGTCTA CCTGAACTAC GCGGCGGTGG ACCCTGACCT CACCAACAGC AAGTGCAGCT ACTGGCACTT CCGCCTGGAT GCCGACACCT CCATGAAGAT GGAGGCCATG ACCACCTTCA TCAAGGACCA TCCTGAGGTC CAGAAGGTGT ACCTGATCAA CCAGAACTAT TCGCACGGAC ATCAGGTCTC CAAGTACGCC AAGGAGAACC TCAAGCGCAA GCGCCCTGAC GTGCAGATCG TGGGCGACGA CCTGCACCCG CTGGCGCAGG TGCGCGACTT CGCGCCCTAC ATCGCCAAGA TCAAGCAGTC GGGTGCGGAC ACGGTGATCA CGGGCAACTG GGGCTCCGAC CTCGCGCTGC TCATCAAGGC CGCCAACGAT GCAGGCCTGA ACAACGTGAA CTTCTACACC TATTACGGCG GCGTGACAGG CAGCCCCACG GCCATGGGCG CAGGCGCCGC GGGCCGGGTG TACATGGTGT CGTACAACCA CTTGAACCTG CCGGGCGAGA TCGGTCGCAT CATGGGCGAC TACAAGAAGA AGTTCAACGA CGACATGTAC ACCGGCGCCG TGTACCACGC CTTCTCCATG CTGGATTCCG CCTTCGTGAA GGCCAAGTCC ACCGACCCCG TGAAGGTGGC TGCTGCGATG GAAGGCATGA AGTTCAACAG CTTCAACGGC GAAGTGGAGA TGCGCAAGTC CGACCACCAG TTGCAGCAGG GCCTGTTCGT GACCCGCTGG GAAAAGGCGG GCGACAAGTA TCCCCGCGAT GCCGAGAACA CCGGCTACAC CTTCGTACCG GTGAAGTACT ACGAGCCCTA TGTGGCCAGC ACGCCCACGT CGTGCCAGAT GAAGCGGCCT TCCTGA
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Protein sequence | MKFAIKMVAA SAIFACAGGA FAQKGETVKI AWLDPLSGLM AAVGTNQLKS FQFISEEFNK KNASGVKFEI IGIDNKLSPQ ETTSALRSAM DQGARYVVQG NGSGPALAII DALEKHNARN PGKEVVYLNY AAVDPDLTNS KCSYWHFRLD ADTSMKMEAM TTFIKDHPEV QKVYLINQNY SHGHQVSKYA KENLKRKRPD VQIVGDDLHP LAQVRDFAPY IAKIKQSGAD TVITGNWGSD LALLIKAAND AGLNNVNFYT YYGGVTGSPT AMGAGAAGRV YMVSYNHLNL PGEIGRIMGD YKKKFNDDMY TGAVYHAFSM LDSAFVKAKS TDPVKVAAAM EGMKFNSFNG EVEMRKSDHQ LQQGLFVTRW EKAGDKYPRD AENTGYTFVP VKYYEPYVAS TPTSCQMKRP S
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