Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_2020 |
Symbol | |
ID | 7385012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2160422 |
End bp | 2162521 |
Gene Length | 2100 bp |
Protein Length | 699 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643655338 |
Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
Protein accession | YP_002553476 |
Protein GI | 222111212 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.303274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCTG AATACCAGGT CCACGGCGAC GTGGCCGTGA TCACCCTCAA CAACCCGCCC GTCAACGGGC TTGGCCTGGC CACGCGCCAG GGCGTCGTCG ATGGCCTCGA TCGCGCCCAG GCCGACGCGG CCGTCAAGGC CATCGTCATC ACCGGCGCGG GCGGCGCCTT CTCGGGTGGC GCCGACATCA AGGAGTTCGG CACCGACAAG TCGCTGCAGG AGCCCAATCT GCACTCCGTC ATCAACGCCG TCGAGTACTG CACCAAGCCC GTGGTGGCTG TCATCCACAC CGTCTGCATG GGCGGCGGGC TGGAGCTGGC CCTGGGCTGC CACTACCGTG TGGCCGCGCC CGGCTGCAAC GTGGCGCTGC CCGAGGTGAA GCTGGGCATC CTGCCCGGCG CGGGCGGCAC GCAGCGCCTG CCGCGCGTGG TGGGGGTGGA GGCAGCGCTG AACATGATCG TCAGCGGCGA GCCGGTCAAG AGCGAGATGA TCGGCGCCGT GCCCGGCCAG AAGCTGTTCG ACAAGATGAC CGCGTCGCCC GAGTCGCTGG CCGAGGAGGC GCTGGCCTTC GCCCGAAGCG TGGCGGACGT GCGCCCGCTG CCGCTGGTAC GCAACCTGCC GTGCAAGCAC CCCGAGGGCG ATGCGTACTT CCAGTTCGCA CGCAACATGG TCAAGGGCAT GGCCAAGAAC TTCCCCGCGC CCGCCAAGTG CGTGGACGCC GTGGAGGCGG CCACCAAGCG CAAGTTTGCC GACGGCCTGG CGTACGAGCG CGAGCTGTTC ATCAACCTGA TGTGGACGCC CGAGTCGCGC GCGCTGCGCC ACCTGTTCTT TGCGGAGCGT GCCGCGAGCA AGATCCCCGA CGTCCCGTCC GAGACTCCCA AGCGGGATAT CAAGAAGGTC GGCGTGATCG GTGCGGGCAC CATGGGTGGC GGCATCAGCA TGAACTTCCT GAACGCGGGC ATCCCCGTGA CCATCCTGGA GATGAAGCAG GAGGCGCTGG ACCGCGGCAT CGGCACGATC CAGAAGAATT ACGAAGCCCA GGTCAAGAAG GGCAAGCTCA AAGAAGACAA GTACCAGCAG CGCATGGCCC TGCTGTCCAC TACGCTGAAC TATGCCGACC TGAAGGACTG CGACCTGATC ATTGAGGCCG TGTTCGAGGA ACTGGGCGTG AAGGAAGCCG TGTTCAAGCA GCTCGACGCC GTGGCCAAGC CCGGCGCCAT CCTGGCGTCC AACACCTCCA CGCTGGACGT GGACAAAATC GCCGCCTTCA CCCAGCGTCC GCAGGACGTG GTGGGCATGC ACTTCTTCAG TCCCGCCAAC GTGATGAAGC TGCTGGAAGT GGTGCGCGGC AAGGCCACGG CCAAGGACGT GCTGGCCACC GTGATGGCCT TGGCCAAGAA GATCAAGAAG ACGGCCGTGG TCTCTGGCGT GTGCGACGGT TTCATCGGCA ACCGCATGAT CGAGCGCTAC AGCCAGCAGG CCGGCTTCCT GCTGGACGAA GGCTGCACGC CCCAGCAGGT GGACAAGGCC ATCGAGAAGT TCGGCTTCGC CATGGGCCCG TTCCGCATGG GCGACCTGGC CGGCAACGAC ATCGGCTGGG CTATCCGCAA GCGCCGCGCC GTCGAGCAGC CCGACATGAA GTACAGCAAG ACGGCCGACC TGCTGTGCGA GATGGGACGC TTCGGCCAGA AGACCGGGGC GGGCTGGTAC GACTACCAGG CTGGCAAGCG TGACGCGATT CCCAGCGACG TGGTGAACCA GATGATCGAG GCGCACCGCA AGGCCCTGGG CATCACGCCG CGCAAGGTGA GCGACGAGGA GATCGTGCAG CGCCTGGTCT ATGCGCTGGT CAACGAGGGC GCCAAGATCC TGGAAGAGGG CATTGCCAGC AAGTCGGGCG ACATCGACAT GGTGTACCTG ACCGGCTACG GCTTCCCCAT CCACCGCGGC GGTCCCATGC ACTACGCCAG CGAAGTGGGC CTGTTCAACG TGGTGCAGTC CATGAAGCGC TTTGCCCGCA ACCCGCTGGA TGACGCACGC GCCTGGGAGC CCGCGCCGCT GCTGGCCCGG CTGGCCGCCG AAGGCAAGGC CTTTGCCTGA
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Protein sequence | MTAEYQVHGD VAVITLNNPP VNGLGLATRQ GVVDGLDRAQ ADAAVKAIVI TGAGGAFSGG ADIKEFGTDK SLQEPNLHSV INAVEYCTKP VVAVIHTVCM GGGLELALGC HYRVAAPGCN VALPEVKLGI LPGAGGTQRL PRVVGVEAAL NMIVSGEPVK SEMIGAVPGQ KLFDKMTASP ESLAEEALAF ARSVADVRPL PLVRNLPCKH PEGDAYFQFA RNMVKGMAKN FPAPAKCVDA VEAATKRKFA DGLAYERELF INLMWTPESR ALRHLFFAER AASKIPDVPS ETPKRDIKKV GVIGAGTMGG GISMNFLNAG IPVTILEMKQ EALDRGIGTI QKNYEAQVKK GKLKEDKYQQ RMALLSTTLN YADLKDCDLI IEAVFEELGV KEAVFKQLDA VAKPGAILAS NTSTLDVDKI AAFTQRPQDV VGMHFFSPAN VMKLLEVVRG KATAKDVLAT VMALAKKIKK TAVVSGVCDG FIGNRMIERY SQQAGFLLDE GCTPQQVDKA IEKFGFAMGP FRMGDLAGND IGWAIRKRRA VEQPDMKYSK TADLLCEMGR FGQKTGAGWY DYQAGKRDAI PSDVVNQMIE AHRKALGITP RKVSDEEIVQ RLVYALVNEG AKILEEGIAS KSGDIDMVYL TGYGFPIHRG GPMHYASEVG LFNVVQSMKR FARNPLDDAR AWEPAPLLAR LAAEGKAFA
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