| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_2007 |
|---|
| Symbol | |
|---|
| ID | 7384999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 2144987 |
|---|
| End bp | 2145394 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643655325 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_002553463 |
|---|
| Protein GI | 222111199 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
|---|
| TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.100535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGATT TTGGTGCCGA CATTCCCTTC GTCAAAGAGC TGGGCTTCAC CCTGCATCAC
ATGCAGGGCG GAACGTCCGA ACTGCACTTT GAGGCGCGGC CCGAGCACAT GAATTCCTAC
GCCGTCACCC ATGGCGGCGC CACCATGACG CTGCTGGACG TGACCCTGGC CACGGCCGCG
CGCAGCGATA CGCCGGACAT GGGCGTGGTC ACCATCGAGA TGAAGACCAG CTTCATGCAC
CCGGCGCGCG GCCCGCTGGT GGCCAAGGGG CGGCTGCTGC ACCGCACGCG CTCGCTGGCC
TTCGTCGAAG GGGCGGTGTA CGACGCCGAA GGGCGCGTTT GCAGCCATGC CACGGGCACT
TTCAAATACG TGCCCAAGGC CGTGCCCGGC GGCGTGTCCA CCGACTGA
|
|---|
| Protein sequence | MLDFGADIPF VKELGFTLHH MQGGTSELHF EARPEHMNSY AVTHGGATMT LLDVTLATAA
RSDTPDMGVV TIEMKTSFMH PARGPLVAKG RLLHRTRSLA FVEGAVYDAE GRVCSHATGT
FKYVPKAVPG GVSTD
|
|---|
| |