Gene Dtpsy_1983 details

Gene Information

• Locus tag: Dtpsy_1983
• ID: 7382102
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax ebreus TPSY
• Kingdom: Bacteria
• Replicon accession: NC_011992
• Strand: -
• Start bp: 2120522
• End bp: 2121208
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 643655301
• Product: Ankyrin
• Protein accession: YP_002553439
• Protein GI: 222111175
• COG category: [R] General function prediction only
• COG ID: [COG0666] FOG: Ankyrin repeat

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAGCC TGTTGCGGCG TCGCAGCGCC CTGGCGTGGC TGGCCGCGGT TGCCGCCGGC 
ACCGCGGGGC TGGCGCATGC CGGCGCGTAC GACGATTTCC TGCGTGCCAT CGCGCGCGAC 
GATGCCGCCA CGGTGGCTTC GCTGCTGCGC CGCGGGTTTG ACCCCAACGC GCGCGATCCC 
AAGGGGCAGC CCGCGCTGAT CCTGGCCCTG CGCGAGGAAG CGCGGCAGGT GGCCGAGGTG 
CTGATCGCCG CCAAGGGGCT GAAGGTGGAG GAGCGCAATG CCAAGGACGA AAGCGCGCTG 
ATGATGGCCG CGTTGCGCGG CAATCTGCCC GCTGCGCGCG GCCTGATCGC GCGCGAGGCG 
GACGTCAACA AGACCGGCTG GGCGCCGCTG CACTATGCCG CCGCGAGCAC CACGGCCGAT 
GCCGCGGCCA TGGTGGCGCT GTTGCTGGAG CATCACGCCT ACATCGACGC CGCATCGCCC 
AACGGCACCA CGCCGCTGAT GATGGCCGTG CGCTACGGCA CGGCGGATGC GGCGCGCCTG 
CTGATCAGCG AGGGGGCCGA CCCATCGCTG AAGAACCAAC TGGGCCTGTC GGCCGTGGAT 
TTCGCCCTGC GCGCCGACCG GCAGGACATG GTGCAACTGG TGGCGGAGGC CGTACGCCGC 
CGCCAGCCGG ACCGCGGGAA ATGGTAG 

 

Protein sequence

MKSLLRRRSA LAWLAAVAAG TAGLAHAGAY DDFLRAIARD DAATVASLLR RGFDPNARDP 
KGQPALILAL REEARQVAEV LIAAKGLKVE ERNAKDESAL MMAALRGNLP AARGLIAREA 
DVNKTGWAPL HYAAASTTAD AAAMVALLLE HHAYIDAASP NGTTPLMMAV RYGTADAARL 
LISEGADPSL KNQLGLSAVD FALRADRQDM VQLVAEAVRR RQPDRGKW