| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1976 |
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| Symbol | |
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| ID | 7382094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2112582 |
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| End bp | 2114096 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643655293 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002553432 |
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| Protein GI | 222111168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACTTC TGCACATCCT GGGGCTGGCA AGCCTGCTGT GGTTGACCGG TTGCGCGACC
ACTGCCCCTA CGGACAACGC CGCATCCACC ACCGACCCCA CTACTGCCAG CCACACGCCG
CTGTATCCGT CGGGGCCATT GCAGCCCATC ACGGCGAGCG CCGCCAGCGG CCACACAGTG
GCTGGCGTCA GCGCGCCAGC CGATCTGTGG GACCGCATCC GGCGCGGCTT TTCCATGCCC
GACCTGGACA CCGATCTGGT ACGCGACCGG GAACAGTGGT ATGCCGCGCG CCCCGACTAC
ATGCAGCGCA TGACCGAGCG TTCCAGCAAG TACCTGTTCC ATATCGTCGA AGAGCTGGAA
CGCCGGGGCA TGCCCACAGA ACTGGCGCTG CTGCCCTACA TCGAGAGCGC CTTCAACCCT
CAGGCAGTGT CCAGCGCCAA GGCCGCGGGC ATGTGGCAGT TCATGCCGGC CACGGGAACC
TACTTCGACT TGAAGCAGAA CGCCTTCCGC GACGACCGGC GCGATGTGCT GGCGTCCACG
CGCGCGGCAC TGGACTACCT GCAGAAGCTC TACGGCATGT TCGGCGACTG GCATCTGGCC
CTGGCCGCCT ACAACTGGGG AGAAGGCAGC GTGGCCCGCG CGATCGCGCG CAACGAGAAA
CAGGGTCTGG GCACGCGCTA CACCGAGTTG ACGATGCCCG CCGAAACCCG CATGTACGTT
CCCAAACTGC AGGCCGTGAA GAACATCGTG GCTAATCCCG ACAAGTTCAG CACCGAGCTG
CCGTTGATCG AGAACCATCC GTACTTTCAG AGCGTGGAGA TCACGCGCGA CATGGACGTC
ACCCTGGTAG CCAGTCTCGC CGGCGTACGC CTCGAGGATT TCCGCGCCCT GAACCCGTCG
CTGCACAAGC CCGTGATCCT TGCGGCGGGC ATGCCGCAGA TCCTGCTGCC CTGGGAAAAC
GCCCAGGTGT TCCGCAAGAA TCTGGAGGCC TACACCGAAG GCCAATACGC CAGTTGGACG
GTATGGACGG TACCCAACAC GATGAGCGTC TCCACCGCGG CGCAACGCAC GGGCATGAGC
GAAAACGATT TGCGTCAGGT GAATGGCATT CCACCACGCA TGATGATCAA GGCCGGCTCG
GCCCTCATGG TGCCCCGCGC AGCCACCATG CGCGCAGACG TCCCGGGTCA TCTCGCCGAC
AACGGCCAAG TCAGCTTCAC GCCTGAAATC GTGACGCGGC GCACCACGGT GCGCGCGGGC
AAGCGCGACA CCGTGGCCAG CATCGCACGG CGCTACAAGG TCAGCACCGC AGACGTTGCC
GACTGGAACG ACGTGAAGAC CTCCAGCAAG TTCAAGCCCG GAGAACAGGT CGTGATGTAC
CTGCCCGTGC GGCTTGCCGC GACCTCGCTG GCGCGCACCA GCGCGAAACA ACCCATCAGC
CGGGCGACAG TCCGCTCGGC AAAGGCCGGT GCGCCCACAC GCAAGGGCGG CACACCGTCG
AAACGCAAAC GGTAA
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| Protein sequence | MRLLHILGLA SLLWLTGCAT TAPTDNAAST TDPTTASHTP LYPSGPLQPI TASAASGHTV
AGVSAPADLW DRIRRGFSMP DLDTDLVRDR EQWYAARPDY MQRMTERSSK YLFHIVEELE
RRGMPTELAL LPYIESAFNP QAVSSAKAAG MWQFMPATGT YFDLKQNAFR DDRRDVLAST
RAALDYLQKL YGMFGDWHLA LAAYNWGEGS VARAIARNEK QGLGTRYTEL TMPAETRMYV
PKLQAVKNIV ANPDKFSTEL PLIENHPYFQ SVEITRDMDV TLVASLAGVR LEDFRALNPS
LHKPVILAAG MPQILLPWEN AQVFRKNLEA YTEGQYASWT VWTVPNTMSV STAAQRTGMS
ENDLRQVNGI PPRMMIKAGS ALMVPRAATM RADVPGHLAD NGQVSFTPEI VTRRTTVRAG
KRDTVASIAR RYKVSTADVA DWNDVKTSSK FKPGEQVVMY LPVRLAATSL ARTSAKQPIS
RATVRSAKAG APTRKGGTPS KRKR
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