| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1954 |
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| Symbol | |
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| ID | 7382072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 2092494 |
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| End bp | 2093060 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643655271 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_002553410 |
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| Protein GI | 222111146 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCTACTG AACAAGAGCT CTCCGACTTC CTCAAAAGCG TGGACAAGCG TGCTTTCAAG
CGCACGCTTT ACCATGTGCG CAATGAGGAG GCCGCGTTGG ACATCGTTCA GGACAGCATG
CTCAAGCTGG CCGAGCACTA TGGCGACAAA CCGCCGGCCG AGCTACCCAT GCTCTTCCAG
CGCATCCTCA CCAACTGCAT GCTGGATTGG TTCCGGCGAC AGAAGACGCG CAATGCGCTT
TTTTCCAGCC TGAGCGACTT CGAGGGCCCG TCGGACGATG GTTCAGATTT TGATTTTCTC
GAGGTACACG CCGCTGCCAA TGGCGAAATG GCACAGAGTG CGGAGGATTC CGTGCGTCGC
GCACAGGTAC TGCGCGATAT CGATGCCGAG ATCCAAGAAC TGCCCCCACG TCAACGGGAG
GCATTTTTGA TGCGTTACTG GGAAGAAATG GATGTCGCAG AAACCGCAGC CGCCATGGGT
TGCTCCGAAG GCAGCGTCAA GACACACTGC TTTCGGGCCA TCCAAACCCT CAGCAAGGCA
CTGAAGGCCA AAGGAATCGT GCTATGA
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| Protein sequence | MATEQELSDF LKSVDKRAFK RTLYHVRNEE AALDIVQDSM LKLAEHYGDK PPAELPMLFQ
RILTNCMLDW FRRQKTRNAL FSSLSDFEGP SDDGSDFDFL EVHAAANGEM AQSAEDSVRR
AQVLRDIDAE IQELPPRQRE AFLMRYWEEM DVAETAAAMG CSEGSVKTHC FRAIQTLSKA
LKAKGIVL
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