Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1948 |
Symbol | |
ID | 7382066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | - |
Start bp | 2084229 |
End bp | 2085767 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643655265 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_002553404 |
Protein GI | 222111140 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGACA AGCTCATCAT TTTCGACACC ACCTTGCGCG ACGGCGAGCA GTCGCCGGGA GCTTCCATGA CGCGCGATGA AAAGCTGCGC ATTGCCCGTC AACTGGAGCG GCTGCGTGTG GATGTGATCG AGGCGGGTTT TGCCGCCAGT TCCAACGGCG ACTTCGAATC GGTGCAGGCC ATTGCGCGCG CAGTGAAGGA CTCCACGGTC TGCTCGCTGG CACGTGCCAA CGACCGGGAC ATCGCACGTG CTGCCGAGGC GCTCAAAGAG GCAAACCGCG CGCGCATCCA CACATTCATC GCCACCAGCG CGCTGCACAT GGAAAAGAAG CTGCGCATGA CGCCCGAGCA GGTGCTGGAG CAAGCCAGGC AGGCGGTGCG TTTTGCACGC AACCTGGTGG AGGACATCGA ATTCAGCCCC GAGGATGGCT ACCGCAGCGA TCCGGACTTC CTGTGCCGCG TGATCGAGAC GGTGATCGCG GAGGGCGCCA CCACCATCAA CGTGCCCGAC ACCGTGGGTT ACGCCATTCC CGAGCTGTAC GGCAACTTCA TCAAGAACCT TCGCGAGCGC ATTCCCAACA GTGACAAGGC CATCTGGTCC GTGCACTGCC ACAACGATCT GGGCATGGCG GTCGCCAACT CGCTGGCGGG TGTGAAGATC GGCGGGGCAC GCCAGGTGGA GTGCACCATC AACGGCCTGG GAGAGCGTGC GGGCAACTGT TCGCTGGAGG AGGTGGTGAT GGCCGTGAAG ACGCGGCGCG ACTACTTCGG CCTGGACGTC GGCATCGATA CCCAGCACAT CGTGGCCGCC AGCCGCATGG TCAGCCAGAC CACCGGCTTT GTAGTGCAGC CCAACAAGGC CGTGGTGGGC GCCAATGCGT TCGCCCATGC CTCGGGCATC CACCAGGACG GCGTGCTCAA GGCGCGCGAC ACGTACGAGA TCATGCGCGC CGAGGACGTG GGCTGGAGCG CCAACAAGAT CGTGCTGGGC AAACTCAGCG GCCGCAATGC GTTCAAGCAA CGTCTGCAGG AACTGGGCGT CCAGTTGGAG AGCGAAGGCG AAATCAACGT GGCGTTTGCC AAATTCAAGG AACTCGCCGA CCGCAAGAGC GAGATCTTTG ACGAGGACAT CCTGGCACTC GTGAGCGACG AAAGCGTGAC CAGCGAGAAG GAGCAGTTCG GCTTCGTGTC CCTGGCGCAG CACAGCGAGA CGGGCGAACG GCCCGAGGCG ACCATCGTGT TCACCGTGGA CGGCAAGGAA GTCCGCAGCT CCGCGGAGGG TAATGGCCCG GTCGATGCCT CGATGAAGGC CATCGAGGCG CATGTGCGCA GCGGTGCCGA GATGGTGCTG TACTCGGTGA ACGCCATCAG TGGCTCCACC GAAAGCCAGG GCGAAGTCAC CGTGCGGTTG CAGAGCGCCG GCCGGGTGGT GAATGGCGTA GGGGCCGACC CCGACATCGT GGTGGCATCG GCCAAAGCCT ACCTCAGTGC CCTGAATAAA TTACAAAGTA AAGCTGAGCG CGTGGCAGCA CAGGGCTGA
|
Protein sequence | MTDKLIIFDT TLRDGEQSPG ASMTRDEKLR IARQLERLRV DVIEAGFAAS SNGDFESVQA IARAVKDSTV CSLARANDRD IARAAEALKE ANRARIHTFI ATSALHMEKK LRMTPEQVLE QARQAVRFAR NLVEDIEFSP EDGYRSDPDF LCRVIETVIA EGATTINVPD TVGYAIPELY GNFIKNLRER IPNSDKAIWS VHCHNDLGMA VANSLAGVKI GGARQVECTI NGLGERAGNC SLEEVVMAVK TRRDYFGLDV GIDTQHIVAA SRMVSQTTGF VVQPNKAVVG ANAFAHASGI HQDGVLKARD TYEIMRAEDV GWSANKIVLG KLSGRNAFKQ RLQELGVQLE SEGEINVAFA KFKELADRKS EIFDEDILAL VSDESVTSEK EQFGFVSLAQ HSETGERPEA TIVFTVDGKE VRSSAEGNGP VDASMKAIEA HVRSGAEMVL YSVNAISGST ESQGEVTVRL QSAGRVVNGV GADPDIVVAS AKAYLSALNK LQSKAERVAA QG
|
| |