| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1873 |
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| Symbol | |
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| ID | 7382234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 1995100 |
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| End bp | 1996110 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643655190 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_002553330 |
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| Protein GI | 222111066 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTATCC GCTTTGCTCT TGCCGGCCTC GTGGCCGCAC TCGTTGCCAC CGGCGCTGTA
CAGGCGCAGG ACTTCAAGCC GCGCATCGTG CGTTTCGGCT ATGGCCTGGT GGACAACTCC
AACCAGGGCC GCGCGGCCCG CATGTTTGCG CAAGAAGTGG AAAAGGCCAC CGGCGGCAAG
ATGAAGGTGC GTGCCATTGG CAACGCCTCG CTGGGCTCCG ACACGCAGAT GCAGCAGGCG
CTGATCGGCG GCGCGCAGGA GATGATGGTG GGCTCCACCG CCACGCTGGT GGGCCTGGTG
CCGGAGATGG CCGTGTGGGA CACGCCGTTC CTCTTCAGCA ACGCCAAGGA AGCCGATGTG
GTGCTGGACG GCCCCGTGGG CGACAAGATC AAGGCCAAGC TGGAAGCCAA GGGTATGGTG
GGCCTGGTGT ACTGGGAGAA CGGTTTCCGT AACCTCACCA ACAGCAAGCG CCCCGTCGCC
AAGCTGGAAG ACCTGAACGA TATCAAGCTG CGCGTGATGC AGAACAACGT GTTCCTCGAC
AGCTTCAAGG CCCTGGGCGC CAACGCCGTG CCGCTGCCGT TCTCCGAGCT GTTCACCGCG
TTGGAAACGC GCGCCGTGGA CGGTCAGGAG AACCCCTACA ACACCATCGT CTCCAGCAAG
TTCTACGAGG TGCAGAAGTA CCTCACGGTG ACCAACCATG TGTACAGCCC CTGGATCGTC
ACGGTGAGCA AGAAATGGTG GGACGGCCTG TCCGCAGCCG AGAAGAAGGT GCTGCAGGAC
GCCGCCATCA AGAGCCGCGA TTTCGAGCGC AAGGACACGC GTGAAGAGGC CGCCAAGGCC
CTGGCCGACC TGAAGGGCAA GGGCATGCAG GTTAACGAGC TGTCGGCCGC CGAGGCCAAC
CGCATGCGCG AGAAGCTGGT CAGCGTGAAC GCGGGCATCG CCAAGTCGGT GGGCCAGCAG
ACCTGGGACG AGGTGAACGC CGCCGTCCAG CAGGCGCGCA ACGCCAAGTA A
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| Protein sequence | MRIRFALAGL VAALVATGAV QAQDFKPRIV RFGYGLVDNS NQGRAARMFA QEVEKATGGK
MKVRAIGNAS LGSDTQMQQA LIGGAQEMMV GSTATLVGLV PEMAVWDTPF LFSNAKEADV
VLDGPVGDKI KAKLEAKGMV GLVYWENGFR NLTNSKRPVA KLEDLNDIKL RVMQNNVFLD
SFKALGANAV PLPFSELFTA LETRAVDGQE NPYNTIVSSK FYEVQKYLTV TNHVYSPWIV
TVSKKWWDGL SAAEKKVLQD AAIKSRDFER KDTREEAAKA LADLKGKGMQ VNELSAAEAN
RMREKLVSVN AGIAKSVGQQ TWDEVNAAVQ QARNAK
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