| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1779 |
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| Symbol | alaS |
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| ID | 7382546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | + |
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| Start bp | 1894714 |
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| End bp | 1897338 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643655096 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002553236 |
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| Protein GI | 222110972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAC CCACTTTCTC CGTTGCAGAC ATTCGCAAGA CCTTCCTGGA CTTCTTCGCC
GCCAAGGGGC ATACCGTGGT GGCGTCCAGT CCGCTGGTGC CGGGCAACGA CCCCACGCTG
ATGTTCACCA ACTCGGGCAT GGTGCAGTTC AAGGATGTGT TCCTGGGTAC GGACAAGCGC
CCCTATGTGC GCGCCACATC GGTGCAGACC TGCCTGCGCG CCGGCGGCAA GCACAACGAT
CTGGAGAACG TGGGCTACAC CGCGCGCCAC CACACGTTTT TCGAGATGCT GGGCAACTGG
AGCTTTGGCG ACTACTTCAA GCGCGAGTCG CTCAAGTGGG CCTGGGAGCT GCTGACCGAG
GTCTACAAGC TGCCTCCCGA GCGCTTGCTG GCCACGGTCT ACGCCGAGGA CGACGAGGCC
TACGACATCT GGACCAAAGA AATCGGCCTG CCGCCCGAGC GTGTGATCCG CATCGGCGAC
AACAAGGGCG GCCGCTACAA GAGCGACAAC TTCTGGATGA TGGCCGACAC CGGCCCCTGT
GGCCCGTGCT CGGAAATCTT CTACGACCAC GGCGAGCACA TTGCCGGCGG CCCCCCGGGC
AGCCCGGATG AGGACGGCGA CCGCTTCATC GAAATCTGGA ACAACGTGTT CATGCAGTTC
GACATGGACG AGCAAGGCAA CGTCAAGCCG CTGCCCGCAC CCTGCGTGGA CACCGGCATG
GGCCTGGAGC GCCTGGCCGC CATCCTGCAG CACGTGCACA GCAACTACGA GATCGACCTG
TTCGACGCGC TGATCAAGGC CGCGGCGCGC GAAACAGGCA CAAGCGACCT GACCAACCCG
TCGCTCAAGG TCATCGCCGA CCACATCCGC GCCACCGCCT TCCTGGTCGC CGACGGTGTC
ATCCCCAGCA ACGAGGGCCG CGGCTACGTG CAGCGCCGCA TCGTGCGCCG CGCCATTCGC
CACGGCTACA AGCTGGGTCG CAAGACGCCG TTCTTCCACA AGCTGGTGCA AGACCTGGTG
CAGCAGATGG GCGATGCGTA CCCCAAGATC CGCGAGCAAC AGGCGCGCAT CACGGATGTG
CTGCGGGTGG AAGAGGAACG CTTCTTCGAG ACCCTGGCGC ACGGCATGGA GATTCTGGAC
AGCGCTTTGG CTGGCGGTGC CAAGACGCTG CCGGGCGACG TGGCGTTCAA GCTGCACGAC
ACCTATGGCT TCCCGCTGGA CCTGACGAAC GACGTGTGCC GCGAACGGGG CGTCAATGTG
GACGAAGCGG GCTTTGCCAC CGCCATGGAG CACCAGAAGA GCACTGCCCG CGCCGCAGGC
AAGTTCAAGA TGGACCGCGC GCTGGAATAC ACCGGCGCGG CCAACCAGTT CACGGGCTAC
GAGCAACTGG CCGAAAGTGC CAAGATCGTC GCGCTGTACG TGGACGGCAC CAGCACTGCG
GCCCTGCACG CGGGTCAGAG CGGCGTGGTG GTGCTGGACC GCACGCCGTT CTATGCCGAA
AGCGGCGGCC AGGTGGGCGA CCAAGGCACC ATCGGCGCTG GCTCGGCGTG CTTCAGCGTG
GCCGACACGC AGAAAATCAA GGCCGACGTC TACGGCCACC ACGGCACGCT GGAAGCCGGC
ACGCTGAATG TGGGCGACAC GGTGCAGGCG CAGGTGGACC TGCAACTGCG CGCGGCCACC
ATGCGCAACC ACTCGGTCAC CCACCTCATG CACAAGGCGT TGCGCGAGGT GCTGGGCGAC
CATGTGCAGC AAAAGGGCAG CCTGGTGAAC GCCGAGCGCA CGCGCTTTGA CTTCGCGCAC
AACGCGCCGC TGACGGCCGC GCAGATTCGC GAGATCGAAC GCCTGGTGAA TGCCGAGGTG
CTGGCCAATA CCGACACTAA CGCGCGCCTG ATGGATATCG AAAGCGCGCA GAAAACGGGC
GCCATGATGT TGTTCGGCGA GAAGTACGGC GAGACTGTGC GTGTGCTGGA CATCGGCACC
AGCCGCGAGC TGTGCGGCGG CACGCACGTG CGCCGCACGG GCGACATCGG CCTGTTCAAG
GTGGTGGCTG AGGGCGGCGT GGCCGCAGGC GTGCGCCGCA TCGAGGCGGT GACCGGCGAG
AACGCGCTGG CCTACCTGCA GTCGCTGGAG TCCACGGTGG ACCAGGCTGC AGCCGCCCTG
AAGGCGCCCC CCGCGGAGCT GACCGCCCGC ATTGGCGGTG CGCTCGATCA GATCAAGACG
CTCGAGAAGG AACTGGCTGC ACTCAAGGGC AAGCTGGCTT CCAGCCAGGG CGATGAGCTG
GCCGGCCAGG CCGTGGACGT CAAGGGCATC AAGGTGCTGG CGGCCCGGCT GGAAGGCGCG
GACGCCAAGA CCCTGCGCGA GACCATGGAC AAGCTCAAGG ACAAGCTCAA GACGGCGGCC
ATCGTGCTGG CGGCCGTCGA TGGCGACAAG GTGCAGCTGG CGGCTGGCGT GACGGCCGAC
AGCATCGGCC GTGTCAAGGC CGGGGATCTG GTCAACTTCG TGGCGGCCCA GGTGGGTGGC
AAAGGGGGCG GAAAACCCGA CATGGCTATG GCCGGCGGCA CCAACGCGGC GGCGCTGCCG
CAGGCGCTGG CAGCCGTGCA GGGCTGGGTG GGCGAGCGCA TCTGA
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| Protein sequence | MSTPTFSVAD IRKTFLDFFA AKGHTVVASS PLVPGNDPTL MFTNSGMVQF KDVFLGTDKR
PYVRATSVQT CLRAGGKHND LENVGYTARH HTFFEMLGNW SFGDYFKRES LKWAWELLTE
VYKLPPERLL ATVYAEDDEA YDIWTKEIGL PPERVIRIGD NKGGRYKSDN FWMMADTGPC
GPCSEIFYDH GEHIAGGPPG SPDEDGDRFI EIWNNVFMQF DMDEQGNVKP LPAPCVDTGM
GLERLAAILQ HVHSNYEIDL FDALIKAAAR ETGTSDLTNP SLKVIADHIR ATAFLVADGV
IPSNEGRGYV QRRIVRRAIR HGYKLGRKTP FFHKLVQDLV QQMGDAYPKI REQQARITDV
LRVEEERFFE TLAHGMEILD SALAGGAKTL PGDVAFKLHD TYGFPLDLTN DVCRERGVNV
DEAGFATAME HQKSTARAAG KFKMDRALEY TGAANQFTGY EQLAESAKIV ALYVDGTSTA
ALHAGQSGVV VLDRTPFYAE SGGQVGDQGT IGAGSACFSV ADTQKIKADV YGHHGTLEAG
TLNVGDTVQA QVDLQLRAAT MRNHSVTHLM HKALREVLGD HVQQKGSLVN AERTRFDFAH
NAPLTAAQIR EIERLVNAEV LANTDTNARL MDIESAQKTG AMMLFGEKYG ETVRVLDIGT
SRELCGGTHV RRTGDIGLFK VVAEGGVAAG VRRIEAVTGE NALAYLQSLE STVDQAAAAL
KAPPAELTAR IGGALDQIKT LEKELAALKG KLASSQGDEL AGQAVDVKGI KVLAARLEGA
DAKTLRETMD KLKDKLKTAA IVLAAVDGDK VQLAAGVTAD SIGRVKAGDL VNFVAAQVGG
KGGGKPDMAM AGGTNAAALP QALAAVQGWV GERI
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