Gene Dtpsy_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_1734 
Symbol 
ID7385298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp1839810 
End bp1840994 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content68% 
IMG OID643655050 
Productbeta-ketothiolase 
Protein accessionYP_002553191 
Protein GI222110927 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.6798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGTG ACGTCGTCGT AGTCAGTGCC GTGCGCACCG CCATTGGCAC CTTTGGCGGT 
AGCCTGAAGG ACGTTCCGCC CACCGAGCTG GGCGCGCTCG TGGTGCGCGC GTCGCTGGCA
CGCGCGCAAG TGGACGGCAA GGACGTCGGC CATGTGGTGT TTGGCCACGT GGTGAACACC
GAGCCCAAGG ACATGTACCT CTCGCGCGTG GCGGCCATCC AGGGCGGCTG CGCCGAGGGC
ACGCCCGCGT TCAACGTGAA CCGCCTGTGC GGCTCGGGCT TGCAGGCCAT CGTGTCAGCC
GCACAGACCA TCCAGCTGGG CGATGCCGAC GTGGCCATCG GCGGCGGCGC GGAGGTGATG
AGCCGCGCAC CCTACGCGAG CCTTGCCAGC CGCTGGGGCG CGCGCATGGG CGACTTCAAG
ATGATCGACA TGATGATCGG CGCCCTGCAC GACCCCTTCC ACAACATCCA CATGGGCGTG
ACGGCCGAGA ACATCGCCGC CAAGTGGGGC ATCACGCGCG AAGACCAGGA CCGCCTGGCC
GTGGAGAGTC ACAACCGTGC CGAGCGTGCC ACGGCAGCGG GCTACTTCAA GGACCAGATC
GTCCCGGTCA CCCTCAAGAG CAAGAAGGGC GAGGTGCAAT ACGCCACCGA CGAGCACTTC
CGCGCCGGCG CAACGCTGGA CGACATGGCC AAGCTCAAGC CCGTGTTTGC GAAAGACAAC
GGCACGGTGA CGGCGGGCAA TGCCTCGGGC ATCAACGATG CGGCTGCCGC TGTCGTGCTG
ATGGATGCCA AGGCAGCGCA GGCCCGTGGC GCAAAGCCTT TGGCGCGCTT GGTGGCCTAC
GCCCATGCGG GCGTGGACCC GAAGTACATG GGCATCGGCC CCGTGCCCGC GACGCAGTTG
GCGCTCAAGA AGGCAGGCCT CACGGTCAAC GACCTGGACG TGATCGAGGC CAACGAGGCC
TTTGCCGCGC AGGCCTGCGC CGTCACGCGC GACCTGGGCC TGGACCCGGC CAAGGTCAAC
CCCAACGGGT CGGGCATTTC GCTGGGCCAT CCCATCGGCG CCACCGGTGC GCTGATCACC
GTGAAGGCAC TGCACGAACT GCAGCGCATC CAGGGCCGGT ACGCGCTGGT GACCATGTGC
ATCGGCGGTG GGCAAGGCAT CGCGGCCATT TTCGAGCGCC TCTGA
 
Protein sequence
MSRDVVVVSA VRTAIGTFGG SLKDVPPTEL GALVVRASLA RAQVDGKDVG HVVFGHVVNT 
EPKDMYLSRV AAIQGGCAEG TPAFNVNRLC GSGLQAIVSA AQTIQLGDAD VAIGGGAEVM
SRAPYASLAS RWGARMGDFK MIDMMIGALH DPFHNIHMGV TAENIAAKWG ITREDQDRLA
VESHNRAERA TAAGYFKDQI VPVTLKSKKG EVQYATDEHF RAGATLDDMA KLKPVFAKDN
GTVTAGNASG INDAAAAVVL MDAKAAQARG AKPLARLVAY AHAGVDPKYM GIGPVPATQL
ALKKAGLTVN DLDVIEANEA FAAQACAVTR DLGLDPAKVN PNGSGISLGH PIGATGALIT
VKALHELQRI QGRYALVTMC IGGGQGIAAI FERL