| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_1705 |
|---|
| Symbol | |
|---|
| ID | 7385269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | + |
|---|
| Start bp | 1811516 |
|---|
| End bp | 1812535 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643655021 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002553162 |
|---|
| Protein GI | 222110898 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0408] Coproporphyrinogen III oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0573078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACAC AAAAACCCAC CTTCAACACG GCGGACACCG TGGCCCGCGT GCGCGGCTAT
CTGGAGGGCC TGCAGGCGCG CATCACCAGC GCGCTGGAGG ACATCGAGGG GCCGCAAAGC
CACGGCGGGG CGCGCTTTCG GTCCGATGCC TGGCGGCGCG AAAGCGGCTC TGCACTGCAG
GGCGACGGCA TCACGCGCAT CCTGGAAGGT GGGCGCGTGT TCGAGCGCGC GGGCTGCGGC
TTCTCGCATG TGAGCGGGCC GCGTCTGCCG CCCTCGGCCA CGCAGCACCG GCCGGAGCTG
GCGGGTGCGC CGTTCGAGGC CATGGGCGTG TCGCTGGTGT TTCACCCGCG CAACCCCTAT
GTGCCCACGG TGCACATGAA CGTGCGCATG ATCGCAGCCG GCACAGGTGC GGCCGGCACA
GGTGCGGCCG GCACAGGTGC GGCCGGCACA GAAGCGGCAG GTCAGGCAGG CCAGGGCCCC
ATCTGCTGGT TCGGCGGCGG CATGGACCTC ACGCCGTACT ACGGTTTCGA CGAGGATGCG
GTGCACTTTC ACCGTGCCTG CCGCGATGCG CTCGCACCCT TCGGCGAAGG CCTGTACCCG
CGCTTCAAGA CCTGGTGCGA CGAGTACTTC TACCTTAAGC ACCGCAATGA GCAGCGCGGC
GTGGGCGGCA TCTTCTTTGA CGACTTCGCG GAGCTGGGCT TCGAGCAGAG CCTGGCCATG
ACGCAGAGCG TGGGCGATGC CTTCCTGGGC GCTTACCTGC CCATCGTGCA GCGGCGCATG
CACATGGACC ATGGCGAGCG CGAACGCGAG TTCCAGCTCT ACCGGCGTGG CCGCTATGTG
GAGTTCAACC TGGTGTGGGA CCGCGGCACG CACTTCGGCC TGCAGTCGGG TGGGCGCACG
GAATCCATCC TGCTGTCCAT GCCGCCGCTG GCGGCCTGGT CCTACCAGCG CGAGCCGCAG
CCGGGCTCGC CCGAGGCGCT GTTGACCGAG CGCTTTCTGC AGCGCCGCGA CTGGATCTGA
|
|---|
| Protein sequence | MTTQKPTFNT ADTVARVRGY LEGLQARITS ALEDIEGPQS HGGARFRSDA WRRESGSALQ
GDGITRILEG GRVFERAGCG FSHVSGPRLP PSATQHRPEL AGAPFEAMGV SLVFHPRNPY
VPTVHMNVRM IAAGTGAAGT GAAGTGAAGT EAAGQAGQGP ICWFGGGMDL TPYYGFDEDA
VHFHRACRDA LAPFGEGLYP RFKTWCDEYF YLKHRNEQRG VGGIFFDDFA ELGFEQSLAM
TQSVGDAFLG AYLPIVQRRM HMDHGERERE FQLYRRGRYV EFNLVWDRGT HFGLQSGGRT
ESILLSMPPL AAWSYQREPQ PGSPEALLTE RFLQRRDWI
|
|---|
| |