Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1672 |
Symbol | |
ID | 7384746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1771458 |
End bp | 1773680 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643654989 |
Product | DNA ligase, NAD-dependent |
Protein accession | YP_002553130 |
Protein GI | 222110866 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.672303 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACCGG GCCTGACCCT TTCCGGCATG ACTGAACAAT CCAGCCTTTT TCCGGCTCCC GCGCCCAAGG GGTCTGCGCT GGTAGCTGCA AAAATCAAAG CGCTGCGCGA GCAGTTGAAC CGCTGGGCGC ACGAGTACTA CGTCCAGGAC ACGCCGAGCG TGCCCGATGC CGAGTATGAC CGCGCGTTCC AGGAATTGCA GGCGCTGGAG GGCGCTTACC CCGACCTGGT GACGCCCGAC TCGCCCACGC AGCGCGTGCT GGGCGCGGTG CTGGACGGGC TGACACCGGT GCGCCACCGC GTGCCCATGC TCAGCATCCG CACCGAAACC GACACCGAGG CCAGCGGCGC CCAAGCCTTC GACGCGCGCG TGCGCCGTGA ACTGAAGCTG CCGCCCGATG CGCCGCCGGT GGAATACGTG GCCGAACCCA AGTTCGACGG CCTGGCGATG AGCCTGCGCT ACGAGGGCGG GCGCCTGGTG CAGGCCGCCA CGCGCGGTGA CGGCGAGGTG GGCGAGGACG TGACGCACAA CGTGCGCACC ATCCGCCAGA TCCCCCTGAG CCTGCCCGCC GGCGTGCCGC GGGTGCTGGA GGTGCGCGGG GAGGTCTACA TGCGCCGCGC GGACTTCGAC GCACTCAACG AGCGCCAGCG CGAGAAGGGC GACAAGACCT TCGTCAACCC GCGCAACGCC GCCGCCGGCG CGGTGCGCCA GTTGGACTCA GGCATCACCG CGCAGCGGCC GCTGTCCTTC TTCGCCTACG GCCTGGGCGA GGTCACGCCG GCCGCCGAGG GCGGGCCCGA CTTCGGCACG CACTTCGGCA TGCTGCAGCA GCTCAAGGAA TGGGGCTTTC CGGTTGCAGC CCAGGTGCAG ATTGCGCAAG GCGCTTCTGA ACTCATAGCG TTCCATCAGC GTGTGGGGGC CGAACGGGAC GCGCTGCCCT ACGACATCGA CGGCGTGGTC TACAAGGTCA ACAGCCTGGC ACTGCAGCGC CAGCTGGGCT TTGTGACGCG CGAGCCGCGC TGGGCCGTGG CTCACAAATA CCCGGCCCAG GAGATGGTCA CGCGCGTGGA AGGTATCGAC GTGCAGGTGG GCCGCACGGG CAAGCTGACC CCTGTGGCGC GACTCGCGCC GGTGTTCGTG GGCGGCGTCA CGGTGACCAA TGCCACGCTG CACAACCTGT TCGAGCTGCG CCGCAAGAAA GTGCGCGTGG GCGACCAGGT GATCGTGCGC CGCGCGGGCG ACGTGATTCC CGAGGTGGTG GGCGTGGTGC CGGCGGGCGC AGGCCTGGCA GTGCTGGCGG GCTCCGACGC GCTGGTGGAC GCCGCCAGCA GCGCGGACGG CACCGCACCC GCGCAGCCGC TGGCGGGGCC GCGCCAGCCC TACGTGCCCA ACTTCCGCAT GCCGCGCCAG TGCCCCATCT GCGGCAGCGC CGTGGTGCGC GAGCCGGGCG AGGTCAACCA CCGCTGCTCC GGCGGGCTGT TCTGCCCCGC GCAGCGCAAA CAGGCGGTGC TGCACTTCGC CCAGCGCCGC GCCATGGACA TCGAGGGCCT GGGCGAGAAG CTGGTGGACC AGCTCGTCGA GGGCCACGTG ATCCGCACGC TGCCCGACCT GTACCGGCTC GGGCTGTCCA GCCTTGCGCA GCTCGACCGC ATGGCCGAGA AGTCCGCGCA GAACGTGCTG GATGCGCTCG ACAAATCCAA GCGCACCACG CTGGCGCGCT TTCTCTTCGG CCTGGGCATC CGCCATGTGG GCGAGGCCAC GGCCAAGGAC CTGGCACGCC ACTTCGGCCG GCTCGACGCC ATCATGGATG CGGGCGTGGA ACAGTTGCTG CAGGTGAACG ACGTGGGGCC CGTGGTGGCC GAGGCCATCC ACACCTTCTT CGCGCAACCG CACAACCGCG AGGTGGTGGA GCAGCTGCGC GCCTGCGGCG TCACCTGGGA CGAGAGCGAG CCCGCTGCCG CCGCCACGCT GCCCCTGGCG GGCATGACCG TGGTGCTGAC CGGCACGCTG CCCACCTTGG GCCGCGACGC AGCCAAGGAC CTGCTGGAAT CCGCCGGTGC CAAGGTGGCG GGCTCGGTCA GCAAGAAGAC GCACTACGTG GTGGCCGGCG CCGACGCGGG CAGCAAGCTC GCCAAGGCGC AGGAACTGGG CATCCCCGTG CTGGACGAGG ACGGGTTGCG TGCGTTGCTG CGGGGCGCGC CGCCCAACGC AGGTGGGGGC TAG
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Protein sequence | MGPGLTLSGM TEQSSLFPAP APKGSALVAA KIKALREQLN RWAHEYYVQD TPSVPDAEYD RAFQELQALE GAYPDLVTPD SPTQRVLGAV LDGLTPVRHR VPMLSIRTET DTEASGAQAF DARVRRELKL PPDAPPVEYV AEPKFDGLAM SLRYEGGRLV QAATRGDGEV GEDVTHNVRT IRQIPLSLPA GVPRVLEVRG EVYMRRADFD ALNERQREKG DKTFVNPRNA AAGAVRQLDS GITAQRPLSF FAYGLGEVTP AAEGGPDFGT HFGMLQQLKE WGFPVAAQVQ IAQGASELIA FHQRVGAERD ALPYDIDGVV YKVNSLALQR QLGFVTREPR WAVAHKYPAQ EMVTRVEGID VQVGRTGKLT PVARLAPVFV GGVTVTNATL HNLFELRRKK VRVGDQVIVR RAGDVIPEVV GVVPAGAGLA VLAGSDALVD AASSADGTAP AQPLAGPRQP YVPNFRMPRQ CPICGSAVVR EPGEVNHRCS GGLFCPAQRK QAVLHFAQRR AMDIEGLGEK LVDQLVEGHV IRTLPDLYRL GLSSLAQLDR MAEKSAQNVL DALDKSKRTT LARFLFGLGI RHVGEATAKD LARHFGRLDA IMDAGVEQLL QVNDVGPVVA EAIHTFFAQP HNREVVEQLR ACGVTWDESE PAAAATLPLA GMTVVLTGTL PTLGRDAAKD LLESAGAKVA GSVSKKTHYV VAGADAGSKL AKAQELGIPV LDEDGLRALL RGAPPNAGGG
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