Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dtpsy_1579 |
Symbol | |
ID | 7382508 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax ebreus TPSY |
Kingdom | Bacteria |
Replicon accession | NC_011992 |
Strand | + |
Start bp | 1665506 |
End bp | 1666045 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643654895 |
Product | peptide deformylase |
Protein accession | YP_002553038 |
Protein GI | 222110774 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCC GCACCATCCT GAAGATGGGC GACCCGCGAC TGTTGCGGGT GGCCCAACCC GTTACCGCAT TCGATACGCC CGCGCTGCAC CAACTGGTGA ACGACATGCG CGAGACGATG CAGGCCGTGA ACGGCGCGGG CCTGGCAGCA CCGCAGATCG GGGAGGATTG GCAGGTGGTG ATCTTCGGCT CCGGCGAGCG CAACCCGCGC TATCCCGACC GCCCCATCGT GCCGCCCACG GTGCTCATCA ATCCCGTGAT CACGCCGCTG GGCGCCGACG AGGAGGACGA CTGGGAGGGC TGCCTGTCCG TGCCGGGCCT GCGCGGCAAG GTGCCGCGCT TTGCGCGCAT CCACTACCGC GGCGTCGATC TGCTGGGCGC GCCCATCGAT CGTGTGGCGG AAGGTTTCCA CGCGCGGGTA GTGCAGCACG AGTGCGACCA CCTGATCGGC AAGCTCTACC CAATGCGCGT GCGCGATTTC ACGCAGTTCG GTTACACGGA GGTGTTGTTT CCGGAGATTG GTGCGGTAGA AGACGATTGA
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Protein sequence | MTIRTILKMG DPRLLRVAQP VTAFDTPALH QLVNDMRETM QAVNGAGLAA PQIGEDWQVV IFGSGERNPR YPDRPIVPPT VLINPVITPL GADEEDDWEG CLSVPGLRGK VPRFARIHYR GVDLLGAPID RVAEGFHARV VQHECDHLIG KLYPMRVRDF TQFGYTEVLF PEIGAVEDD
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